| IPR038376 | ATP synthase, alpha subunit, C-terminal domain superfamily | Homologous Superfamily |
| IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | Domain |
| IPR033732 | ATP synthase, F1 complex, alpha subunit nucleotide-binding domain | Domain |
| IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | Homologous Superfamily |
| IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily | Homologous Superfamily |
| IPR000793 | ATP synthase, alpha subunit, C-terminal | Domain |
| IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | Active Site |
| IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Domain |
| IPR005294 | ATP synthase, F1 complex, alpha subunit | Family |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | Domain |
| IPR024034 | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal | Homologous Superfamily |
| IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | Homologous Superfamily |
| IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | Active Site |
| IPR050053 | ATPase alpha/beta chains | Family |
| IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Domain |
| IPR055190 | ATP synthase A/B type, C-terminal domain | Domain |
| IPR003593 | AAA+ ATPase domain | Domain |
| IPR005722 | ATP synthase, F1 complex, beta subunit | Family |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| IPR023632 | ATP synthase, F1 complex, gamma subunit conserved site | Conserved Site |
| IPR000131 | ATP synthase, F1 complex, gamma subunit | Family |
| IPR035968 | ATP synthase, F1 complex, gamma subunit superfamily | Homologous Superfamily |
| IPR036771 | F0F1 ATP synthase delta/epsilon subunit, N-terminal | Homologous Superfamily |
| IPR036794 | ATP synthase delta/epsilon subunit, C-terminal domain superfamily | Homologous Superfamily |
| IPR020546 | ATP synthase, F1 complex, delta/epsilon subunit, N-terminal | Domain |
| IPR020547 | ATP synthase epsilon subunit, C-terminal domain | Domain |
| IPR001469 | ATP synthase, F1 complex, delta/epsilon subunit | Family |
| S [auth W] | IPR000711 | ATPase, OSCP/delta subunit | Family |
| S [auth W] | IPR026015 | F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily | Homologous Superfamily |
| V [auth a] | IPR023011 | ATP synthase, F0 complex, subunit A, active site | Active Site |
| V [auth a] | IPR000568 | ATP synthase, F0 complex, subunit A | Family |
| V [auth a] | IPR035908 | ATP synthase, F0 complex, subunit A superfamily | Homologous Superfamily |
| V [auth a] | IPR045082 | ATP synthase, F0 complex, subunit A, bacterial/chloroplast | Family |
T [auth X], U [auth Y] | IPR002146 | ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast | Family |
T [auth X], U [auth Y] | IPR005864 | ATP synthase, F0 complex, subunit b, bacterial | Family |
T [auth X], U [auth Y] | IPR050059 | ATP synthase B chain | Family |
T [auth X], U [auth Y] | IPR028987 | F-type ATP synthase subunit B-like, membrane domain superfamily | Homologous Superfamily |
| IPR035921 | F/V-ATP synthase subunit C superfamily | Homologous Superfamily |
| IPR005953 | ATP synthase, F0 complex, subunit C, bacterial/chloroplast | Family |
| IPR038662 | F1F0 ATP synthase subunit C superfamily | Homologous Superfamily |
| IPR020537 | ATP synthase, F0 complex, subunit C, DCCD-binding site | Binding Site |
| IPR000454 | ATP synthase, F0 complex, subunit C | Family |
| IPR002379 | V-ATPase proteolipid subunit C-like domain | Domain |