Annotations: 9NB1

CRYO-EM STRUCTURE OF human U7 SNRNP WITH MUTANT LSM11 that disrupts contacts with CPSF73

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth J]	SCOP2B Superfamily	ARM repeat-like	8093027	3000116	SCOP2B (2022-06-29)
E [auth G]	SCOP2B Superfamily	Sm-like ribonucleoproteins	8063468	3000419	SCOP2B (2022-06-29)
D [auth F]	SCOP2B Superfamily	Sm-like ribonucleoproteins	8063452	3000419	SCOP2B (2022-06-29)
C [auth E]	SCOP2B Superfamily	Sm-like ribonucleoproteins	8063476	3000419	SCOP2B (2022-06-29)
L [auth H]	SCOP2B Superfamily	Metallo-hydrolase/oxidoreductase	8034424	3001057	SCOP2B (2022-06-29)
J [auth B]	SCOP2B Superfamily	Sm-like ribonucleoproteins	8041747	3000419	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Sm-like ribonucleoproteins	8041751	3000419	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth J]	Beta-Casp	e9nb1J1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
E [auth G]	Beta-Casp	e9nb1G1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
D [auth F]	Beta-Casp	e9nb1F1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
C [auth E]	Beta-Casp	e9nb1E1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
B [auth C]	Beta-Casp	e9nb1C1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
M [auth I]	Beta-Casp	e9nb1I1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
L [auth H]	Beta-Casp	e9nb1H1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
J [auth B]	Beta-Casp	e9nb1B1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)
A	Beta-Casp	e9nb1A1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Beta-Casp	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F [auth J]	PF11935	Symplekin/PTA1 N-terminal (SYMPK_PTA1_N)	Symplekin/PTA1 N-terminal	-	Repeat
E [auth G]	PF01423	LSM domain (LSM)	LSM domain	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.	Domain
D [auth F]	PF01423	LSM domain (LSM)	LSM domain	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.	Domain
C [auth E]	PF01423	LSM domain (LSM)	LSM domain	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.	Domain
B [auth C]	PF01423	LSM domain (LSM)	LSM domain	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.	Domain
M [auth I]	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain (RMMBL)	Zn-dependent metallo-hydrolase RNA specificity domain	-	Motif
M [auth I]	PF16661	Metallo-beta-lactamase superfamily domain (Lactamase_B_6)	Metallo-beta-lactamase superfamily domain	This family is part of the metallo-beta-lactamase superfamily.	Domain
M [auth I]	PF13299	Cleavage and polyadenylation factor 2 C-terminal (CPSF100_C)	Cleavage and polyadenylation factor 2 C-terminal	-	Family
M [auth I]	PF10996	Beta-Casp domain (Beta-Casp)	Beta-Casp domain	The beta-CASP domain is found C terminal to the beta-lactamase domain in pre-mRNA 3'-end-processing endonuclease. The active site of this enzyme is located at the interface of these two domains [1].	Domain
L [auth H]	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain (RMMBL)	Zn-dependent metallo-hydrolase RNA specificity domain	-	Motif
L [auth H]	PF11718	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term (CPSF73-100_C)	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term	This is the C-terminal conserved region of the pre-mRNA 3'-end-processing of the polyadenylation factor CPSF-73/CPSF-100 proteins. The exact function of this domain is not known.	Domain
L [auth H]	PF00753	Metallo-beta-lactamase superfamily (Lactamase_B)	Metallo-beta-lactamase superfamily		Domain
L [auth H]	PF10996	Beta-Casp domain (Beta-Casp)	Beta-Casp domain	The beta-CASP domain is found C terminal to the beta-lactamase domain in pre-mRNA 3'-end-processing endonuclease. The active site of this enzyme is located at the interface of these two domains [1].	Domain
J [auth B]	PF01423	LSM domain (LSM)	LSM domain	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.	Domain
A	PF01423	LSM domain (LSM)	LSM domain	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...	The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth Z]	U7 snRNA	-	-	-
H [auth Y]	modified H2a pre-mRNA	-	-	-
G [auth K]	CstF77	-	-	-
F [auth J]	Symplekin	-	mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing metabolic process cellular process RNA processing macromolecule metabolic process regulation of protein binding regulation of molecular function negative regulation of protein binding regulation of binding negative regulation of binding biological regulation negative regulation of molecular function regulation of cellular process catabolic process negative regulation of biological process macromolecule catabolic process negative regulation of cellular process RNA catabolic process negative regulation of macromolecule metabolic process histone mRNA catabolic process regulation of biosynthetic process mRNA catabolic process nuclear-transcribed mRNA catabolic process regulation of biological process histone mRNA metabolic process negative regulation of metabolic process regulation of macromolecule metabolic process nucleobase-containing compound catabolic process regulation of gene expression negative regulation of gene expression nuclear histone mRNA catabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process nucleic acid catabolic process regulation of macromolecule biosynthetic process regulation of metabolic process	membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex mRNA cleavage factor complex intracellular membrane-bounded organelle cytoskeleton membraneless organelle intracellular membraneless organelle nuclear stress granule membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex mRNA cleavage factor complex intracellular membrane-bounded organelle cytoskeleton membraneless organelle intracellular membraneless organelle nuclear stress granule membrane-enclosed lumen intracellular organelle lumen ribonucleoprotein granule nuclear body nucleoplasm organelle lumen supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cell-cell junction apical junction complex bicellular tight junction tight junction anchoring junction cell junction cell periphery plasma membrane membrane cytoplasm mRNA cleavage and polyadenylation specificity factor complex
E [auth G]	Small nuclear ribonucleoprotein G	RNA binding binding nucleic acid binding	regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process primary metabolic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process negative regulation of mRNA metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process negative regulation of RNA splicing RNA splicing, via transesterification reactions negative regulation of biosynthetic process mRNA splicing, via spliceosome cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis spliceosomal complex assembly protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization U2-type prespliceosome assembly spliceosomal tri-snRNP complex assembly spliceosomal snRNP assembly spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) spliceosomal conformational changes to generate catalytic conformation catabolic process macromolecule catabolic process RNA catabolic process histone mRNA catabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process histone mRNA metabolic process nucleobase-containing compound catabolic process nuclear histone mRNA catabolic process nucleic acid catabolic process 7-methylguanosine cap hypermethylation RNA capping macromolecule methylation RNA modification methylation macromolecule modification RNA 5'-end processing RNA methylation	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex spliceosomal snRNP complex Sm-like protein family complex U4 snRNP small nuclear ribonucleoprotein complex P granule cytoplasmic ribonucleoprotein granule germ plasm intracellular membraneless organelle ribonucleoprotein granule membraneless organelle cytoplasm supramolecular complex catalytic step 2 spliceosome catalytic complex U12-type catalytic step 2 spliceosome spliceosomal tri-snRNP complex U4atac/U6atac x U5 tri-snRNP complex U2-type spliceosomal complex U2-type catalytic step 1 spliceosome catalytic step 1 spliceosome U2 snRNP cytosol U4/U6 snRNP U4/U6 x U5 tri-snRNP complex U4atac/U6atac snRNP U1 snRNP membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen SMN-Sm protein complex U11/U12 snRNP U2-type precatalytic spliceosome methylosome methyltransferase complex transferase complex U5 snRNP U7 snRNP post-spliceosomal complex prespliceosome U2-type prespliceosome post-mRNA release spliceosomal complex U4atac snRNP U2-type catalytic step 2 spliceosome
D [auth F]	Small nuclear ribonucleoprotein F	RNA binding binding nucleic acid binding	regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process primary metabolic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process negative regulation of mRNA metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process negative regulation of RNA splicing RNA splicing, via transesterification reactions negative regulation of biosynthetic process mRNA splicing, via spliceosome cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis spliceosomal complex assembly protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization U2-type prespliceosome assembly spliceosomal tri-snRNP complex assembly spliceosomal snRNP assembly spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) spliceosomal conformational changes to generate catalytic conformation catabolic process macromolecule catabolic process RNA catabolic process histone mRNA catabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process histone mRNA metabolic process nucleobase-containing compound catabolic process nuclear histone mRNA catabolic process nucleic acid catabolic process 7-methylguanosine cap hypermethylation RNA capping macromolecule methylation RNA modification methylation macromolecule modification RNA 5'-end processing RNA methylation	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex spliceosomal snRNP complex Sm-like protein family complex U4 snRNP small nuclear ribonucleoprotein complex pICln-Sm protein complex cytoplasm catalytic step 2 spliceosome catalytic complex U12-type catalytic step 2 spliceosome spliceosomal tri-snRNP complex U4atac/U6atac x U5 tri-snRNP complex U2-type spliceosomal complex U2-type catalytic step 1 spliceosome catalytic step 1 spliceosome U2 snRNP cytosol U4/U6 snRNP U4/U6 x U5 tri-snRNP complex U4atac/U6atac snRNP U1 snRNP membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen SMN-Sm protein complex U11/U12 snRNP U2-type precatalytic spliceosome methylosome methyltransferase complex transferase complex U5 snRNP U7 snRNP post-spliceosomal complex post-mRNA release spliceosomal complex U4atac snRNP U2-type catalytic step 2 spliceosome
C [auth E]	Small nuclear ribonucleoprotein E	RNA binding binding nucleic acid binding	regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process primary metabolic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process negative regulation of mRNA metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process negative regulation of RNA splicing RNA splicing, via transesterification reactions negative regulation of biosynthetic process mRNA splicing, via spliceosome cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis spliceosomal complex assembly protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization U2-type prespliceosome assembly spliceosomal tri-snRNP complex assembly spliceosomal snRNP assembly spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) spliceosomal conformational changes to generate catalytic conformation catabolic process macromolecule catabolic process RNA catabolic process histone mRNA catabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process histone mRNA metabolic process nucleobase-containing compound catabolic process nuclear histone mRNA catabolic process nucleic acid catabolic process 7-methylguanosine cap hypermethylation RNA capping macromolecule methylation RNA modification methylation macromolecule modification RNA 5'-end processing RNA methylation	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex spliceosomal snRNP complex Sm-like protein family complex U4 snRNP small nuclear ribonucleoprotein complex pICln-Sm protein complex cytoplasm catalytic step 2 spliceosome catalytic complex U12-type catalytic step 2 spliceosome spliceosomal tri-snRNP complex U4atac/U6atac x U5 tri-snRNP complex U2-type spliceosomal complex U2-type catalytic step 1 spliceosome catalytic step 1 spliceosome telomerase holoenzyme complex U2 snRNP cytosol U4/U6 snRNP U4/U6 x U5 tri-snRNP complex U4atac/U6atac snRNP U1 snRNP membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen SMN-Sm protein complex U11/U12 snRNP U2-type precatalytic spliceosome methylosome methyltransferase complex transferase complex U5 snRNP U7 snRNP post-spliceosomal complex post-mRNA release spliceosomal complex U4atac snRNP U2-type catalytic step 2 spliceosome
B [auth C]	U7 snRNA-associated Sm-like protein LSm10	RNA binding snRNA binding binding U7 snRNA binding nucleic acid binding histone pre-mRNA DCP binding	histone mRNA metabolic process mRNA 3'-end processing mRNA 3'-end processing by stem-loop binding and cleavage RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA metabolic process macromolecule biosynthetic process mRNA processing nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process histone mRNA metabolic process mRNA 3'-end processing mRNA 3'-end processing by stem-loop binding and cleavage RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA metabolic process macromolecule biosynthetic process mRNA processing nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA 3'-end processing macromolecule metabolic process RNA processing regulation of cellular process catabolic process negative regulation of biological process macromolecule catabolic process negative regulation of cellular process RNA catabolic process negative regulation of macromolecule metabolic process histone mRNA catabolic process regulation of biosynthetic process mRNA catabolic process nuclear-transcribed mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation regulation of macromolecule metabolic process nucleobase-containing compound catabolic process regulation of gene expression negative regulation of gene expression nuclear histone mRNA catabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process nucleic acid catabolic process regulation of macromolecule biosynthetic process regulation of metabolic process 7-methylguanosine cap hypermethylation RNA capping macromolecule methylation RNA modification methylation macromolecule modification RNA 5'-end processing RNA methylation regulation of cell cycle phase transition positive regulation of biological process cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition mitotic cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle phase transition positive regulation of cell cycle process positive regulation of mitotic cell cycle cell cycle regulation of cell cycle positive regulation of cellular process cell cycle process positive regulation of G1/S transition of mitotic cell cycle regulation of cell cycle process positive regulation of cell cycle regulation of mitotic cell cycle phase transition positive regulation of cell cycle G1/S phase transition mitotic cell cycle process regulation of G1/S transition of mitotic cell cycle positive regulation of cell cycle phase transition G1/S transition of mitotic cell cycle mitotic cell cycle phase transition	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure cytoplasmic U snRNP body organelle membraneless organelle cytoplasm supramolecular complex membrane-bounded organelle Cajal body nucleus intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure cytoplasmic U snRNP body organelle membraneless organelle cytoplasm supramolecular complex membrane-bounded organelle Cajal body nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nuclear body nucleoplasm organelle lumen nuclear ribonucleoprotein granule nuclear lumen protein-containing complex nuclear protein-containing complex Sm-like protein family complex U7 snRNP small nuclear ribonucleoprotein complex ribonucleoprotein complex
M [auth I]	Cleavage and polyadenylation specificity factor subunit 2	RNA binding binding nucleic acid binding	mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing metabolic process cellular process RNA processing macromolecule metabolic process histone mRNA metabolic process mRNA 3'-end processing by stem-loop binding and cleavage regulation of cellular process catabolic process negative regulation of biological process macromolecule catabolic process negative regulation of cellular process RNA catabolic process negative regulation of macromolecule metabolic process histone mRNA catabolic process regulation of biosynthetic process mRNA catabolic process nuclear-transcribed mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation regulation of macromolecule metabolic process nucleobase-containing compound catabolic process regulation of gene expression negative regulation of gene expression nuclear histone mRNA catabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process nucleic acid catabolic process regulation of macromolecule biosynthetic process regulation of metabolic process	membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex mRNA cleavage factor complex intracellular membrane-bounded organelle membrane mRNA cleavage and polyadenylation specificity factor complex postsynapse synapse membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex mRNA cleavage factor complex intracellular membrane-bounded organelle membrane mRNA cleavage and polyadenylation specificity factor complex postsynapse synapse cell junction membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen glutamatergic synapse
L [auth H]	Cleavage and polyadenylation specificity factor subunit 3	endonuclease activity nuclease activity catalytic activity, acting on RNA RNA endonuclease activity catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity 5'-3' RNA exonuclease activity 5'-3' exonuclease activity RNA exonuclease activity, producing 5'-phosphomonoesters RNA exonuclease activity hydrolase activity hydrolase activity, acting on ester bonds exonuclease activity endonuclease activity nuclease activity catalytic activity, acting on RNA RNA endonuclease activity catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity 5'-3' RNA exonuclease activity 5'-3' exonuclease activity RNA exonuclease activity, producing 5'-phosphomonoesters RNA exonuclease activity hydrolase activity hydrolase activity, acting on ester bonds exonuclease activity RNA binding binding nucleic acid binding cation binding ion binding metal ion binding small molecule binding	mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing metabolic process cellular process RNA processing macromolecule metabolic process co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway histone mRNA metabolic process mRNA 3'-end processing by stem-loop binding and cleavage regulation of cellular process catabolic process negative regulation of biological process macromolecule catabolic process negative regulation of cellular process RNA catabolic process negative regulation of macromolecule metabolic process histone mRNA catabolic process regulation of biosynthetic process mRNA catabolic process nuclear-transcribed mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation regulation of macromolecule metabolic process nucleobase-containing compound catabolic process regulation of gene expression negative regulation of gene expression nuclear histone mRNA catabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process nucleic acid catabolic process regulation of macromolecule biosynthetic process regulation of metabolic process regulation of cell cycle phase transition positive regulation of biological process cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition mitotic cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle phase transition positive regulation of cell cycle process positive regulation of mitotic cell cycle cell cycle regulation of cell cycle positive regulation of cellular process cell cycle process positive regulation of G1/S transition of mitotic cell cycle regulation of cell cycle process positive regulation of cell cycle regulation of mitotic cell cycle phase transition positive regulation of cell cycle G1/S phase transition mitotic cell cycle process regulation of G1/S transition of mitotic cell cycle positive regulation of cell cycle phase transition G1/S transition of mitotic cell cycle mitotic cell cycle phase transition	membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex mRNA cleavage factor complex intracellular membrane-bounded organelle mRNA cleavage and polyadenylation specificity factor complex membrane-enclosed lumen intracellular organelle lumen nucleoplasm membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex mRNA cleavage factor complex intracellular membrane-bounded organelle mRNA cleavage and polyadenylation specificity factor complex membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
K [auth D]	U7 snRNA-associated Sm-like protein LSm11	-	-	-
J [auth B]	Small nuclear ribonucleoprotein-associated proteins B and B'	histone pre-mRNA DCP binding RNA binding binding nucleic acid binding U1 snRNP binding ribonucleoprotein complex binding snRNP binding protein-containing complex binding telomerase RNA binding U2 snRNP binding	regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process primary metabolic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process negative regulation of mRNA metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process negative regulation of RNA splicing RNA splicing, via transesterification reactions negative regulation of biosynthetic process mRNA splicing, via spliceosome cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis spliceosomal complex assembly protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization U2-type prespliceosome assembly spliceosomal tri-snRNP complex assembly spliceosomal snRNP assembly spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) spliceosomal conformational changes to generate catalytic conformation catabolic process macromolecule catabolic process RNA catabolic process histone mRNA catabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process histone mRNA metabolic process nucleobase-containing compound catabolic process nuclear histone mRNA catabolic process nucleic acid catabolic process 7-methylguanosine cap hypermethylation RNA capping macromolecule methylation RNA modification methylation macromolecule modification RNA 5'-end processing RNA methylation protein methylation protein alkylation protein metabolic process protein modification process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex spliceosomal snRNP complex Sm-like protein family complex U4 snRNP small nuclear ribonucleoprotein complex catalytic step 2 spliceosome catalytic complex U12-type catalytic step 2 spliceosome spliceosomal tri-snRNP complex U4atac/U6atac x U5 tri-snRNP complex cytoplasm cytosol SMN-Sm protein complex post-mRNA release spliceosomal complex U2-type spliceosomal complex U2-type catalytic step 2 spliceosome U2-type catalytic step 1 spliceosome catalytic step 1 spliceosome telomerase holoenzyme complex U2 snRNP histone pre-mRNA 3'end processing complex U4/U6 snRNP U4/U6 x U5 tri-snRNP complex U4atac/U6atac snRNP U1 snRNP membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen U11/U12 snRNP U2-type precatalytic spliceosome methylosome methyltransferase complex transferase complex U5 snRNP U7 snRNP post-spliceosomal complex prespliceosome U2-type prespliceosome U4atac snRNP
A	Small nuclear ribonucleoprotein Sm D3	histone pre-mRNA DCP binding RNA binding binding nucleic acid binding telomerase RNA binding snRNA binding U7 snRNA binding protein binding enzyme binding	regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process primary metabolic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process negative regulation of mRNA metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process negative regulation of RNA splicing RNA splicing, via transesterification reactions negative regulation of biosynthetic process mRNA splicing, via spliceosome cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis spliceosomal complex assembly protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization U2-type prespliceosome assembly spliceosomal tri-snRNP complex assembly spliceosomal snRNP assembly spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) spliceosomal conformational changes to generate catalytic conformation catabolic process macromolecule catabolic process RNA catabolic process histone mRNA catabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process histone mRNA metabolic process nucleobase-containing compound catabolic process nuclear histone mRNA catabolic process nucleic acid catabolic process 7-methylguanosine cap hypermethylation RNA capping macromolecule methylation RNA modification methylation macromolecule modification RNA 5'-end processing RNA methylation protein methylation protein alkylation protein metabolic process protein modification process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle U12-type precatalytic spliceosome intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex precatalytic spliceosome U12-type spliceosomal complex spliceosomal snRNP complex Sm-like protein family complex U4 snRNP small nuclear ribonucleoprotein complex pICln-Sm protein complex cytoplasm catalytic step 2 spliceosome catalytic complex U12-type catalytic step 2 spliceosome spliceosomal tri-snRNP complex U4atac/U6atac x U5 tri-snRNP complex cytosol SMN-Sm protein complex post-mRNA release spliceosomal complex U2-type spliceosomal complex U2-type catalytic step 2 spliceosome U2-type catalytic step 1 spliceosome catalytic step 1 spliceosome telomerase holoenzyme complex U2 snRNP U4/U6 snRNP U4/U6 x U5 tri-snRNP complex U4atac/U6atac snRNP U1 snRNP membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen U11/U12 snRNP U2-type precatalytic spliceosome methylosome methyltransferase complex transferase complex U5 snRNP U7 snRNP commitment complex post-spliceosomal complex intracellular membraneless organelle nuclear body membraneless organelle U4atac snRNP

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth J]	IPR022075	Symplekin C-terminal	Domain
F [auth J]	IPR016024	Armadillo-type fold	Homologous Superfamily
F [auth J]	IPR021850	Symplekin/Pta1	Family
F [auth J]	IPR032460	Symplekin/Pta1, N-terminal	Domain
F [auth J]	IPR011989	Armadillo-like helical	Homologous Superfamily
E [auth G]	IPR044641	Sm-like protein Lsm7/SmG	Family
E [auth G]	IPR034098	Small nuclear ribonucleoprotein G	Family
E [auth G]	IPR001163	Sm domain, eukaryotic/archaea-type	Domain
E [auth G]	IPR047575	Sm domain	Domain
E [auth G]	IPR010920	LSM domain superfamily	Homologous Superfamily
D [auth F]	IPR016487	Sm-like protein Lsm6/SmF	Family
D [auth F]	IPR034100	Small nuclear ribonucleoprotein F	Family
D [auth F]	IPR001163	Sm domain, eukaryotic/archaea-type	Domain
D [auth F]	IPR047575	Sm domain	Domain
D [auth F]	IPR010920	LSM domain superfamily	Homologous Superfamily
C [auth E]	IPR027078	Small nuclear ribonucleoprotein E	Family
C [auth E]	IPR001163	Sm domain, eukaryotic/archaea-type	Domain
C [auth E]	IPR047575	Sm domain	Domain
C [auth E]	IPR010920	LSM domain superfamily	Homologous Superfamily
B [auth C]	IPR001163	Sm domain, eukaryotic/archaea-type	Domain
B [auth C]	IPR052840	U7 snRNA-associated Sm-like	Family
B [auth C]	IPR047575	Sm domain	Domain
B [auth C]	IPR010920	LSM domain superfamily	Homologous Superfamily
M [auth I]	IPR001279	Metallo-beta-lactamase	Domain
M [auth I]	IPR022712	Beta-Casp domain	Domain
M [auth I]	IPR027075	Cleavage and polyadenylation specificity factor subunit 2	Family
M [auth I]	IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	Domain
M [auth I]	IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Homologous Superfamily
M [auth I]	IPR025069	Cleavage and polyadenylation specificity factor 2, C-terminal	Domain
M [auth I]	IPR035639	CPSF2, metallo-hydrolase domain	Domain
L [auth H]	IPR001279	Metallo-beta-lactamase	Domain
L [auth H]	IPR022712	Beta-Casp domain	Domain
L [auth H]	IPR050698	RNA Processing Metallo-Beta-Lactamase	Family
L [auth H]	IPR021718	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term	Domain
L [auth H]	IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	Domain
L [auth H]	IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Homologous Superfamily
J [auth B]	IPR017131	Small ribonucleoprotein associated, SmB/SmN	Family
J [auth B]	IPR047575	Sm domain	Domain
J [auth B]	IPR001163	Sm domain, eukaryotic/archaea-type	Domain
J [auth B]	IPR010920	LSM domain superfamily	Homologous Superfamily
A	IPR027141	Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3	Family
A	IPR034099	Small nuclear ribonucleoprotein Sm D3	Family
A	IPR047575	Sm domain	Domain
A	IPR001163	Sm domain, eukaryotic/archaea-type	Domain
A	IPR010920	LSM domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
F [auth J]	: Q92797	chronic obstructive pulmonary disease gallbladder disease heart disease Malignant neoplasm of stomach ovarian cancer psoriasis gastric cancer hereditary diffuse gastric adenocarcinoma myocardial infarction pancreatic intraductal papillary-mucinous carcinoma gastric neoplasm malignant colon neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia
E [auth G]	: P62308	Adenocarcinoma of Lung lung adenocarcinoma
D [auth F]	: P62306	atypical teratoid rhabdoid tumor glioblastoma malignant ependymoma primitive neuroectodermal tumor chronic obstructive pulmonary disease large cell medulloblastoma malignant glioma squamous cell carcinoma cutaneous melanoma lung cancer medulloblastoma
C [auth E]	: P62304	hypotrichosis hypotrichosis 11 hypotrichosis simplex breast carcinoma
B [auth C]	: Q969L4	ovarian cancer pancreatic ductal adenocarcinoma Sjogren syndrome
M [auth I]	: Q9P2I0	adenoma breast cancer hepatocellular carcinoma malignant glioma myopathy primitive neuroectodermal tumor atypical teratoid rhabdoid tumor exocrine pancreatic carcinoma large cell medulloblastoma malignant pancreatic neoplasm ovarian cancer B-cell acute lymphoblastic leukemia glioblastoma malignant ependymoma medulloblastoma adenoma breast cancer hepatocellular carcinoma malignant glioma myopathy primitive neuroectodermal tumor atypical teratoid rhabdoid tumor exocrine pancreatic carcinoma large cell medulloblastoma malignant pancreatic neoplasm ovarian cancer B-cell acute lymphoblastic leukemia glioblastoma malignant ependymoma medulloblastoma pancreatic ductal adenocarcinoma
L [auth H]	: Q9UKF6	large cell medulloblastoma osteosarcoma subependymal giant cell astrocytoma Malignant neoplasm of breast ovarian cancer medulloblastoma primitive neuroectodermal tumor
J [auth B]	: P14678	cerebrocostomandibular syndrome intellectual disability ovarian cancer atypical teratoid rhabdoid tumor dermatomyositis Disease Progression glioblastoma invasive ductal breast carcinoma malignant glioma medulloblastoma plasma cell myeloma diabetes mellitus gastric cancer hereditary diffuse gastric adenocarcinoma large cell medulloblastoma cerebrocostomandibular syndrome intellectual disability ovarian cancer atypical teratoid rhabdoid tumor dermatomyositis Disease Progression glioblastoma invasive ductal breast carcinoma malignant glioma medulloblastoma plasma cell myeloma diabetes mellitus gastric cancer hereditary diffuse gastric adenocarcinoma large cell medulloblastoma malignant mesothelioma osteosarcoma psoriasis gastric neoplasm lymphoplasmacytic lymphoma
A	: P62318	carcinoma Mammary Neoplasms, Experimental HIV infectious disease sarcomatoid carcinoma acne lymphoplasmacytic lymphoma ovarian cancer undifferentiated carcinoma medulloblastoma plasma cell myeloma dermatomyositis lung cancer mammary neoplasms, animal non-alcoholic fatty liver disease