9NB1 | pdb_00009nb1

CRYO-EM STRUCTURE OF human U7 SNRNP WITH MUTANT LSM11 that disrupts contacts with CPSF73


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Small nuclear ribonucleoprotein Sm D3
B [auth C]U7 snRNA-associated Sm-like protein LSm10
C [auth E]Small nuclear ribonucleoprotein E
D [auth F]Small nuclear ribonucleoprotein F
E [auth G]Small nuclear ribonucleoprotein G
G [auth K]CstF77---
H [auth Y]modified H2a pre-mRNA---
I [auth Z]U7 snRNA---
J [auth B]Small nuclear ribonucleoprotein-associated proteins B and B'
K [auth D]U7 snRNA-associated Sm-like protein LSm11---
L [auth H]Cleavage and polyadenylation specificity factor subunit 3
M [auth I]Cleavage and polyadenylation specificity factor subunit 2
F [auth J]Symplekin-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR027141Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3Family
IPR034099Small nuclear ribonucleoprotein Sm D3Family
IPR001163Sm domain, eukaryotic/archaea-typeDomain
IPR047575Sm domainDomain
IPR010920LSM domain superfamilyHomologous Superfamily
B [auth C]IPR001163Sm domain, eukaryotic/archaea-typeDomain
B [auth C]IPR052840U7 snRNA-associated Sm-likeFamily
B [auth C]IPR047575Sm domainDomain
B [auth C]IPR010920LSM domain superfamilyHomologous Superfamily
C [auth E]IPR027078Small nuclear ribonucleoprotein EFamily
C [auth E]IPR001163Sm domain, eukaryotic/archaea-typeDomain
C [auth E]IPR047575Sm domainDomain
C [auth E]IPR010920LSM domain superfamilyHomologous Superfamily
D [auth F]IPR016487Sm-like protein Lsm6/SmFFamily
D [auth F]IPR034100Small nuclear ribonucleoprotein FFamily
D [auth F]IPR001163Sm domain, eukaryotic/archaea-typeDomain
D [auth F]IPR047575Sm domainDomain
D [auth F]IPR010920LSM domain superfamilyHomologous Superfamily
E [auth G]IPR044641Sm-like protein Lsm7/SmGFamily
E [auth G]IPR034098Small nuclear ribonucleoprotein GFamily
E [auth G]IPR001163Sm domain, eukaryotic/archaea-typeDomain
E [auth G]IPR047575Sm domainDomain
E [auth G]IPR010920LSM domain superfamilyHomologous Superfamily
J [auth B]IPR001163Sm domain, eukaryotic/archaea-typeDomain
J [auth B]IPR017131Small ribonucleoprotein associated, SmB/SmNFamily
J [auth B]IPR047575Sm domainDomain
J [auth B]IPR010920LSM domain superfamilyHomologous Superfamily
L [auth H]IPR001279Metallo-beta-lactamaseDomain
L [auth H]IPR022712Beta-Casp domainDomain
L [auth H]IPR050698RNA Processing Metallo-Beta-LactamaseFamily
L [auth H]IPR021718Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-termDomain
L [auth H]IPR011108Zn-dependent metallo-hydrolase, RNA specificity domainDomain
L [auth H]IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeHomologous Superfamily
M [auth I]IPR001279Metallo-beta-lactamaseDomain
M [auth I]IPR022712Beta-Casp domainDomain
M [auth I]IPR027075Cleavage and polyadenylation specificity factor subunit 2Family
M [auth I]IPR011108Zn-dependent metallo-hydrolase, RNA specificity domainDomain
M [auth I]IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeHomologous Superfamily
M [auth I]IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalDomain
M [auth I]IPR035639CPSF2, metallo-hydrolase domainDomain
F [auth J]IPR022075Symplekin C-terminalDomain
F [auth J]IPR016024Armadillo-type foldHomologous Superfamily
F [auth J]IPR021850Symplekin/Pta1Family
F [auth J]IPR032460Symplekin/Pta1, N-terminalDomain
F [auth J]IPR011989Armadillo-like helicalHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP62318
B [auth C]PharosQ969L4
C [auth E]PharosP62304
D [auth F]PharosP62306
E [auth G]PharosP62308
J [auth B]PharosP14678
L [auth H]PharosQ9UKF6
M [auth I]PharosQ9P2I0
F [auth J]PharosQ92797