9LVJ | pdb_00009lvj

Cryo-EM structure of Sestrin2 bound human GATOR2 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
R [auth V]SCOP2B SuperfamilyAhpD-like 8093133 3001907 SCOP2B (2022-06-29)
R [auth V]SCOP2B SuperfamilyAhpD-like 8093134 3001907 SCOP2B (2022-06-29)
Q [auth U]SCOP2B SuperfamilyAhpD-like 8093133 3001907 SCOP2B (2022-06-29)
Q [auth U]SCOP2B SuperfamilyAhpD-like 8093134 3001907 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C,
K [auth M]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
Q [auth U],
R [auth V]
PF04636PA26 p53-induced protein (sestrin) (PA26)PA26 p53-induced protein (sestrin)- Family
H,
P [auth R]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
D,
L [auth N]
PF17120RING/Ubox like zinc-binding domain (zf-RING_16)RING/Ubox like zinc-binding domainDomain
A,
B,
I [auth K],
J [auth L]
PF17034Zinc-ribbon like family (zinc_ribbon_16)Zinc-ribbon like family- Family
A,
B,
I [auth K],
J [auth L]
PF21719MIOS, alpha-solenoid (MIOS_a-sol)MIOS, alpha-solenoid- Repeat
A,
B,
I [auth K],
J [auth L]
PF21720MIOS, WD40 repeat (MIOS_WD40)MIOS, WD40 repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C,
K [auth M]
GATOR2 complex protein WDR24
Q [auth U],
R [auth V]
Sestrin-2
H,
P [auth R]
Protein SEC13 homolog
Isoform B of Nucleoporin SEH1
D,
L [auth N]
GATOR2 complex protein WDR59
A,
B,
I [auth K],
J [auth L]
GATOR2 complex protein MIOS

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C,
K [auth M]
IPR019775WD40 repeat, conserved siteConserved Site
C,
K [auth M]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C,
K [auth M]
IPR001680WD40 repeatRepeat
C,
K [auth M]
IPR037590GATOR2 complex protein WDR24Family
C,
K [auth M]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
Q [auth U],
R [auth V]
IPR006730SestrinFamily
Q [auth U],
R [auth V]
IPR029032AhpD-likeHomologous Superfamily
H,
P [auth R]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
H,
P [auth R]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
H,
P [auth R]
IPR037363Sec13/Seh1 familyFamily
H,
P [auth R]
IPR001680WD40 repeatRepeat
IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR037363Sec13/Seh1 familyFamily
IPR001680WD40 repeatRepeat
D,
L [auth N]
IPR049566WDR59/RTC1-like, RING zinc finger domainDomain
D,
L [auth N]
IPR016135Ubiquitin-conjugating enzyme/RWD-likeHomologous Superfamily
D,
L [auth N]
IPR049567GATOR complex protein WDR59-likeFamily
D,
L [auth N]
IPR019775WD40 repeat, conserved siteConserved Site
D,
L [auth N]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D,
L [auth N]
IPR039456WDR59, modified RING finger, H2 subclass, C3H3C2-typeDomain
D,
L [auth N]
IPR001680WD40 repeatRepeat
D,
L [auth N]
IPR006575RWD domainDomain
D,
L [auth N]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A,
B,
I [auth K],
J [auth L]
IPR037593MIOS/Sea4Family
A,
B,
I [auth K],
J [auth L]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A,
B,
I [auth K],
J [auth L]
IPR031488GATOR2 complex protein MIO, zinc-ribbon like domainDomain
A,
B,
I [auth K],
J [auth L]
IPR001680WD40 repeatRepeat
A,
B,
I [auth K],
J [auth L]
IPR049092MIOS-like, alpha-solenoid domainDomain
A,
B,
I [auth K],
J [auth L]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily