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 9LKM | pdb_00009lkm

Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyTNF-like 8070836 3000061 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTNF-like 8070836 3000061 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTNF-like 8070836 3000061 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CTCL1_MTCP1e9lkmC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: TCL1_MTCP1ECOD (v295.2)
BTCL1_MTCP1e9lkmB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: TCL1_MTCP1ECOD (v295.2)
ATCL1_MTCP1e9lkmA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: TCL1_MTCP1ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF19188Adhesion GPCR B N-terminal region (AGRB_N)Adhesion GPCR B N-terminal region- Family
A,
B,
C,
E [auth H]		PF00386C1q domain (C1q)C1q domainC1q is a subunit of the C1 enzyme complex that activates the serum complement system. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Adhesion G protein-coupled receptor B3
A,
B,
C,
E [auth H]		C1q-related factor

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR017983GPCR, family 2, secretin-like, conserved siteConserved Site
IPR036445GPCR family 2, extracellular hormone receptor domain superfamilyHomologous Superfamily
IPR000832GPCR, family 2, secretin-likeFamily
IPR000203GPS motifConserved Site
IPR000859CUB domainDomain
IPR017981GPCR, family 2-like, 7TMDomain
IPR008077GPCR, family 2, brain-specific angiogenesis inhibitorFamily
IPR000884Thrombospondin type-1 (TSP1) repeatRepeat
IPR001879GPCR, family 2, extracellular hormone receptor domainDomain
IPR036383Thrombospondin type-1 repeat superfamilyHomologous Superfamily
IPR043838Adhesion G protein-coupled receptor B, N-terminal domainDomain
IPR032471AGRL2-4 , GAIN subdomain ADomain
IPR046338GAIN domain superfamilyHomologous Superfamily
IPR057244GAIN, subdomain BDomain
A,
B,
C,
E [auth H]		IPR008160Collagen triple helix repeatRepeat
A,
B,
C,
E [auth H]		IPR008983Tumour necrosis factor-like domain superfamilyHomologous Superfamily
A,
B,
C,
E [auth H]		IPR001073C1q domainDomain
A,
B,
C,
E [auth H]		IPR050822Cerebellin Synaptic OrganizerFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
:  O60242