Annotations: 9LIP

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	PF00801	PKD domain (PKD)	PKD domain	This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold [1].	Domain
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	PF26141	PMEL/NMB N-terminal domain (PMEL_NMB_N)	PMEL/NMB N-terminal domain	This entry represents the N-terminal domain in PKD PMEL/NMB proteins. These proteins are involved in melanosome morphogenesis and pigmentation. Proteins such as the melanocyte protein PMEL form physiological amyloids that are crucial for the developm ...	This entry represents the N-terminal domain in PKD PMEL/NMB proteins. These proteins are involved in melanosome morphogenesis and pigmentation. Proteins such as the melanocyte protein PMEL form physiological amyloids that are crucial for the development of melanosomes, the organelles responsible for melanin production. They facilitate the transition of premelanosomes from stage I to stage II by assembling amyloidogenic fragments into fibrillar sheets, which help shape the vesicle. In later stages, the amyloid matrix acts as a scaffold for eumelanin precursor accumulation, aiding in pigment formation. Additionally, these proteins may help prevent pigmentation-associated toxicity by sequestering harmful intermediates of the eumelanin biosynthesis pathway [1-2]. This domain contains an RGD motif, which mediates integrin binding. It also contains potential N-glycosylation sites and an Ig-like fold [10].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	M-alpha	identical protein binding protein binding binding	vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process melanin metabolic process secondary metabolic process positive regulation of secondary metabolite biosynthetic process positive regulation of metabolic process secondary metabolite biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process biological regulation positive regulation of melanin biosynthetic process regulation of secondary metabolite biosynthetic process regulation of secondary metabolic process biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process metabolic process melanin biosynthetic process regulation of metabolic process	membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane multivesicular body, internal vesicle endosome intracellular vesicle endosomal intralumenal vesicle cytoplasmic vesicle late endosome vesicle multivesicular body pigment granule melanosome endosome membrane multivesicular body membrane late endosome membrane cytoplasmic vesicle membrane vesicle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle cell periphery plasma membrane chitosome melanosome membrane pigment granule membrane endoplasmic reticulum organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	M-beta	identical protein binding protein binding binding	vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process melanin metabolic process secondary metabolic process positive regulation of secondary metabolite biosynthetic process positive regulation of metabolic process secondary metabolite biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process biological regulation positive regulation of melanin biosynthetic process regulation of secondary metabolite biosynthetic process regulation of secondary metabolic process biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process metabolic process melanin biosynthetic process regulation of metabolic process	membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane multivesicular body, internal vesicle endosome intracellular vesicle endosomal intralumenal vesicle cytoplasmic vesicle late endosome vesicle multivesicular body pigment granule melanosome endosome membrane multivesicular body membrane late endosome membrane cytoplasmic vesicle membrane vesicle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle cell periphery plasma membrane chitosome melanosome membrane pigment granule membrane endoplasmic reticulum organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	M-alpha	identical protein binding protein binding binding	vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process melanin metabolic process secondary metabolic process positive regulation of secondary metabolite biosynthetic process positive regulation of metabolic process secondary metabolite biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process biological regulation positive regulation of melanin biosynthetic process regulation of secondary metabolite biosynthetic process regulation of secondary metabolic process biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process metabolic process melanin biosynthetic process regulation of metabolic process	membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane multivesicular body, internal vesicle endosome intracellular vesicle endosomal intralumenal vesicle cytoplasmic vesicle late endosome vesicle multivesicular body pigment granule melanosome endosome membrane multivesicular body membrane late endosome membrane cytoplasmic vesicle membrane vesicle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle cell periphery plasma membrane chitosome melanosome membrane pigment granule membrane endoplasmic reticulum organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	M-alpha	identical protein binding protein binding binding	vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process vesicle organization cellular component organization melanosome organization organelle organization pigmentation cellular pigmentation cellular process cellular component organization or biogenesis pigment granule organization pigment metabolic process regulation of melanin biosynthetic process regulation of cellular process positive regulation of biological process pigment biosynthetic process melanin metabolic process secondary metabolic process positive regulation of secondary metabolite biosynthetic process positive regulation of metabolic process secondary metabolite biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process biological regulation positive regulation of melanin biosynthetic process regulation of secondary metabolite biosynthetic process regulation of secondary metabolic process biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process metabolic process melanin biosynthetic process regulation of metabolic process	membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane multivesicular body, internal vesicle endosome intracellular vesicle endosomal intralumenal vesicle cytoplasmic vesicle late endosome vesicle multivesicular body pigment granule melanosome endosome membrane multivesicular body membrane late endosome membrane cytoplasmic vesicle membrane vesicle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle cell periphery plasma membrane chitosome melanosome membrane pigment granule membrane endoplasmic reticulum organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR022409	PKD/Chitinase domain	Domain
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR000601	PKD domain	Domain
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR045219	PKD- and KLD-Associated Transmembrane	Family
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR035986	PKD domain superfamily	Homologous Superfamily
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR046846	PKAT, KLD domain	Domain
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	IPR059017	PMEL/NMB, N-terminal domain	Domain
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR022409	PKD/Chitinase domain	Domain
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR000601	PKD domain	Domain
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR045219	PKD- and KLD-Associated Transmembrane	Family
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR035986	PKD domain superfamily	Homologous Superfamily
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR046846	PKAT, KLD domain	Domain
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	IPR059017	PMEL/NMB, N-terminal domain	Domain
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR022409	PKD/Chitinase domain	Domain
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR000601	PKD domain	Domain
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR045219	PKD- and KLD-Associated Transmembrane	Family
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR035986	PKD domain superfamily	Homologous Superfamily
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR046846	PKAT, KLD domain	Domain
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	IPR059017	PMEL/NMB, N-terminal domain	Domain
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR022409	PKD/Chitinase domain	Domain
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR000601	PKD domain	Domain
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR045219	PKD- and KLD-Associated Transmembrane	Family
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR035986	PKD domain superfamily	Homologous Superfamily
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR046846	PKAT, KLD domain	Domain
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	IPR059017	PMEL/NMB, N-terminal domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], A [auth Q], CA [auth k], E [auth U], GA [auth Y], I [auth A], KA [auth c], M [auth E], OA [auth o], Q [auth I], SA [auth s], U [auth M], Y [auth g]	Pharos: P40967	melanoma vitiligo allergic rhinitis attention deficit hyperactivity disorder, inattentive type gastroesophageal reflux disease psoriasis alopecia areata cleft lip Hashimoto thyroiditis Metastatic uveal melanoma rheumatoid arthritis asthma cutaneous lupus erythematosus hypothyroidism polycystic ovary syndrome
BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], BA [auth j], D [auth T], FA [auth n], H [auth X], JA [auth b], L [auth D], NA [auth f], P [auth H], RA [auth r], T [auth L], VA [auth v], X [auth P]	Pharos: P40967	melanoma vitiligo allergic rhinitis attention deficit hyperactivity disorder, inattentive type gastroesophageal reflux disease psoriasis alopecia areata cleft lip Hashimoto thyroiditis Metastatic uveal melanoma rheumatoid arthritis asthma cutaneous lupus erythematosus hypothyroidism polycystic ovary syndrome
AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], AA [auth i], C [auth S], EA [auth m], G [auth W], IA [auth a], K [auth C], MA [auth e], O [auth G], QA [auth q], S [auth K], UA [auth u], W [auth O]	Pharos: P40967	melanoma vitiligo allergic rhinitis attention deficit hyperactivity disorder, inattentive type gastroesophageal reflux disease psoriasis alopecia areata cleft lip Hashimoto thyroiditis Metastatic uveal melanoma rheumatoid arthritis asthma cutaneous lupus erythematosus hypothyroidism polycystic ovary syndrome
B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], B [auth R], DA [auth l], F [auth V], HA [auth Z], J [auth B], LA [auth d], N [auth F], PA [auth p], R [auth J], TA [auth t], V [auth N], Z [auth h]	Pharos: P40967	melanoma vitiligo allergic rhinitis attention deficit hyperactivity disorder, inattentive type gastroesophageal reflux disease psoriasis alopecia areata cleft lip Hashimoto thyroiditis Metastatic uveal melanoma rheumatoid arthritis asthma cutaneous lupus erythematosus hypothyroidism polycystic ovary syndrome