Annotations: 9LA9

Munc13-4-Rab27a complex with GppNHp

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Ras-like P-loop GTPases	8093772	3002022	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MUN	e9la9A2	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MUN	ECOD (v295.2)
A	C2	e9la9A5	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: C2	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00071	Ras family (Ras)	Ras family	Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ...	Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].	Domain
A	PF06292	MUN domain (MUN)	MUN domain	-	Repeat
A	PF00168	C2 domain (C2)	C2 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Ras-related protein Rab-27A	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding GDP binding cytoskeletal protein binding protein binding myosin V binding myosin binding pyrophosphatase activity GTPase activity G protein activity ribonucleoside triphosphate phosphatase activity molecular function regulator activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	vesicle organization cellular component organization organelle organization multivesicular body organization endosome organization cellular process cellular component organization or biogenesis endomembrane system organization regulation of localization regulated exocytosis regulation of cellular process transport positive regulation of biological process positive regulation of secretion by cell vesicle organization cellular component organization organelle organization multivesicular body organization endosome organization cellular process cellular component organization or biogenesis endomembrane system organization regulation of localization regulated exocytosis regulation of cellular process transport positive regulation of biological process positive regulation of secretion by cell vesicle-mediated transport positive regulation of exocytosis regulation of regulated secretory pathway localization secretion by cell regulation of secretion by cell positive regulation of secretion positive regulation of regulated secretory pathway positive regulation of cellular process regulation of biological process secretion regulation of transport biological regulation export from cell regulation of vesicle-mediated transport establishment of localization regulation of secretion exocytosis positive regulation of transport regulation of exocytosis regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process vesicle localization establishment of organelle localization cellular localization establishment of vesicle localization organelle localization establishment of localization in cell synaptic vesicle localization synaptic vesicle transport import into cell positive regulation of cellular component organization regulation of cellular component organization positive regulation of endocytosis phagocytosis regulation of endocytosis regulation of phagocytosis positive regulation of phagocytosis endocytosis positive regulation of constitutive secretory pathway regulation of constitutive secretory pathway constitutive secretory pathway multivesicular body sorting pathway pigmentation pigment granule localization cellular pigmentation melanosome localization establishment of melanosome localization pigment granule transport establishment of pigment granule localization melanosome transport reactive oxygen species biosynthetic process positive regulation of reactive oxygen species biosynthetic process reactive oxygen species metabolic process regulation of reactive oxygen species biosynthetic process positive regulation of reactive oxygen species metabolic process regulation of reactive oxygen species metabolic process establishment of protein localization establishment of protein localization to extracellular region protein secretion protein localization to extracellular region protein transport macromolecule localization intracellular protein localization complement-dependent cytotoxicity cell killing antigen processing and presentation immune system process exosomal secretion extracellular exosome biogenesis cellular component biogenesis extracellular vesicle biogenesis	membrane-bounded organelle intracellular anatomical structure pigment granule intracellular vesicle intracellular membrane-bounded organelle intracellular organelle melanosome cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle endosome membrane endosome membrane-bounded organelle intracellular anatomical structure pigment granule intracellular vesicle intracellular membrane-bounded organelle intracellular organelle melanosome cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle endosome membrane endosome membrane multivesicular body membrane late endosome membrane endomembrane system cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane late endosome organelle membrane multivesicular body cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular membrane-bounded organelle cytosol transport vesicle secretory vesicle exocytic vesicle secretory granule somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection lytic vacuole vacuole lysosome non-motile cilium 9+0 non-motile cilium cilium photoreceptor outer segment photoreceptor cell cilium Golgi apparatus vesicle lumen membrane-enclosed lumen cytoplasmic vesicle lumen secretory granule lumen intracellular organelle lumen organelle lumen specific granule lumen specific granule chitosome melanosome membrane pigment granule membrane
A	Protein unc-13 homolog D	small GTPase binding protein binding binding enzyme binding GTPase binding	localization secretion transport establishment of localization regulation of localization regulated exocytosis regulation of cellular process positive regulation of biological process positive regulation of secretion by cell vesicle-mediated transport positive regulation of exocytosis regulation of regulated secretory pathway secretion by cell regulation of secretion by cell localization secretion transport establishment of localization regulation of localization regulated exocytosis regulation of cellular process positive regulation of biological process positive regulation of secretion by cell vesicle-mediated transport positive regulation of exocytosis regulation of regulated secretory pathway secretion by cell regulation of secretion by cell positive regulation of secretion positive regulation of regulated secretory pathway positive regulation of cellular process regulation of biological process regulation of transport biological regulation export from cell regulation of vesicle-mediated transport regulation of secretion exocytosis positive regulation of transport regulation of exocytosis cellular process vesicle organization cellular component organization platelet dense granule organization organelle organization secretory granule organization cellular component organization or biogenesis endomembrane system organization positive regulation of substrate adhesion-dependent cell spreading regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of substrate adhesion-dependent cell spreading regulation of cell adhesion cell-substrate adhesion cell adhesion positive regulation of cell-substrate adhesion substrate adhesion-dependent cell spreading developmental process multicellular organism development multicellular organismal process anatomical structure development animal gross anatomical part developmental process vasculature development system development circulatory system development establishment of organelle localization regulation of immune effector process regulation of myeloid leukocyte mediated immunity response to stimulus cell activation involved in immune response leukocyte degranulation myeloid leukocyte mediated immunity myeloid leukocyte activation establishment of localization in cell leukocyte mediated immunity regulation of immune system process immune response vacuolar localization mast cell degranulation immune effector process regulation of leukocyte mediated immunity lysosome localization cellular localization regulation of mast cell degranulation leukocyte activation organelle localization leukocyte activation involved in immune response mast cell activation regulation of leukocyte degranulation mast cell mediated immunity cell activation myeloid cell activation involved in immune response mast cell activation involved in immune response immune system process	cellular anatomical structure membrane extracellular region membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle recycling endosome endomembrane system intracellular organelle cytoplasmic vesicle organelle cytoplasm cellular anatomical structure membrane extracellular region membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle recycling endosome endomembrane system intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle cytosol Weibel-Palade body secretory granule clathrin-coated vesicle secretory vesicle coated vesicle transport vesicle exocytic vesicle late endosome lytic vacuole membrane-enclosed lumen cytoplasmic vesicle lumen vacuolar lumen intracellular organelle lumen lysosome vesicle lumen azurophil granule vacuole secretory granule lumen azurophil granule lumen organelle lumen primary lysosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR041837	Rab27a/b	Family
B	IPR050305	Small GTPase superfamily, Rab	Family
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR005225	Small GTP-binding domain	Domain
B	IPR001806	Small GTPase	Family
A	IPR052095	Protein unc-13 homolog D/BAI1-associated protein 3	Family
A	IPR014770	Munc13 homology 1	Domain
A	IPR000008	C2 domain	Domain
A	IPR035892	C2 domain superfamily	Homologous Superfamily
A	IPR010439	MUN domain	Domain
A	IPR014772	Mammalian uncoordinated homology 13, domain 2	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: P51159	Griscelli syndrome type 2 Griscelli syndrome malignant mesothelioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm pituitary cancer adenoma subependymal giant cell astrocytoma Crohn disease gastric carcinoma intellectual disability large cell medulloblastoma malignant ependymoma non-small cell lung carcinoma pancreatic ductal adenocarcinoma Griscelli syndrome type 2 Griscelli syndrome malignant mesothelioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm pituitary cancer adenoma subependymal giant cell astrocytoma Crohn disease gastric carcinoma intellectual disability large cell medulloblastoma malignant ependymoma non-small cell lung carcinoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis atypical teratoid rhabdoid tumor ulcerative colitis cutaneous lupus erythematosus glioblastoma hemophagocytic syndrome interstitial cystitis lung cancer malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma Sjogren syndrome Chediak-Higashi syndrome ductal breast carcinoma in situ IgA glomerulonephritis invasive ductal breast carcinoma malignant colon neoplasm
A	: Q70J99	familial hemophagocytic lymphohistiocytosis 3 hemophagocytic syndrome prostate cancer Chediak-Higashi syndrome Griscelli syndrome leukodystrophy HEMOPHAGOCYTIC LYMPHOHISTIOCYTOSIS, FAMILIAL, 3 lung carcinoma familial hemophagocytic lymphohistiocytosis type 1 osteosarcoma Sjogren syndrome