9L64 | pdb_00009l64

A novel allosteric covalent inhibitory site of fucosyltransferase 8 revealed by crystal structures

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MbtH	e9l64B1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
A	MbtH	e9l64A1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF14604	Variant SH3 domain (SH3_9)	Variant SH3 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Alpha-(1,6)-fucosyltransferase	SH3 domain binding protein binding binding protein domain specific binding fucosyltransferase activity glycosyltransferase activity transferase activity hexosyltransferase activity catalytic activity alpha-(1->6)-fucosyltransferase activity glycoprotein 6-alpha-L-fucosyltransferase activity catalytic activity, acting on a protein catalytic activity, acting on a glycoprotein	carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process nucleoside phosphate metabolic process nucleotide-sugar metabolic process carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process nucleoside phosphate metabolic process nucleotide-sugar metabolic process GDP-L-fucose metabolic process nucleobase-containing compound metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process small molecule metabolic process phosphorus metabolic process carbohydrate metabolic process oligosaccharide biosynthetic process carbohydrate biosynthetic process oligosaccharide metabolic process monosaccharide metabolic process catabolic process hexose catabolic process carbohydrate catabolic process hexose metabolic process fucose metabolic process L-fucose metabolic process L-fucose catabolic process monosaccharide catabolic process small molecule catabolic process N-glycan processing viral gene expression viral protein processing viral process developmental process multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching chordate embryonic development anatomical structure development embryo development in utero embryonic development animal gross anatomical part developmental process	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system Golgi membrane bounding membrane of organelle organelle membrane extracellular exosome cellular anatomical structure membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system Golgi membrane bounding membrane of organelle organelle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region vesicle extracellular membrane-bounded organelle Golgi cisterna membrane Golgi apparatus subcompartment organelle subcompartment Golgi cisterna Golgi stack

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR027350	Glycosyltransferase family 23 (GT23) domain	Domain
A, B	IPR015827	Alpha-(1,6)-fucosyltransferase	Family
A, B	IPR045573	Alpha-(1,6)-fucosyltransferase, N- and catalytic domain	Domain
A, B	IPR035653	Alpha-(1,6)-fucosyltransferase, SH3 domain	Domain
A, B	IPR001452	SH3 domain	Domain
A, B	IPR036028	SH3-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: Q9BYC5	subependymal giant cell astrocytoma Barrett esophagus Crohn disease invasive ductal breast carcinoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma schizophrenia tuberculosis congenital disorder of glycosylation cystic fibrosis large cell medulloblastoma malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia subependymal giant cell astrocytoma Barrett esophagus Crohn disease invasive ductal breast carcinoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma schizophrenia tuberculosis congenital disorder of glycosylation cystic fibrosis large cell medulloblastoma malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia Schizophrenia and related disorders ulcerative colitis congenital disorder of glycosylation with defective fucosylation esophageal adenocarcinoma lung adenocarcinoma medulloblastoma ovarian cancer periodontitis

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.