9KZK | pdb_00009kzk

Structure of mouse C3a bound mouse C3aR in complex with Go


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth G]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
D [auth E]PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ...This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Guanine nucleotide-binding protein G(o) subunit alpha
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
C [auth D]C3a anaphylatoxin
D [auth E]Muscarinic acetylcholine receptor M4,C3a anaphylatoxin chemotactic receptor
E [auth G]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
F [auth H]Antibody fragment - ScFv16---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001408G-protein alpha subunit, group IFamily
IPR019775WD40 repeat, conserved siteConserved Site
IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
IPR001632G-protein beta subunit-like, WD40 repeatsDomain
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR016346G-protein subunit beta 1-5Family
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
C [auth D]IPR019742Alpha-2-macroglobulin, conserved siteConserved Site
C [auth D]IPR009048Alpha-macroglobulin, receptor-bindingDomain
C [auth D]IPR049466Complement component 3, CUB domain, first segmentDomain
C [auth D]IPR001599Alpha-2-macroglobulinDomain
C [auth D]IPR001134Netrin domainDomain
C [auth D]IPR011626Alpha-macroglobulin-like, TED domainDomain
C [auth D]IPR002890Macroglobulin domainDomain
C [auth D]IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth D]IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
C [auth D]IPR041555Macroglobulin domain MG3Domain
C [auth D]IPR047565Alpha-macroglobulin-like, thiol-ester bond-forming regionConserved Site
C [auth D]IPR048848Complement component 3, CUB domain, second segmentDomain
C [auth D]IPR018081Anaphylatoxin, complement systemHomologous Superfamily
C [auth D]IPR035815Complement C3-like, NTR domainDomain
C [auth D]IPR018933Netrin module, non-TIMP typeDomain
C [auth D]IPR001840Anaphylatoxin, complement system domainDomain
C [auth D]IPR041425Complement C3/4/5, macroglobulin domain MG1Domain
C [auth D]IPR011625Alpha-2-macroglobulin, bait region domainDomain
C [auth D]IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldHomologous Superfamily
C [auth D]IPR000020Anaphylatoxin/fibulinDomain
C [auth D]IPR036595Alpha-macroglobulin, receptor-binding domain superfamilyHomologous Superfamily
C [auth D]IPR050473Alpha-2-macroglobulin/Complement systemFamily
C [auth D]IPR040839Macroglobulin domain MG4Domain
D [auth E]IPR002234Anaphylatoxin chemotactic receptor, C3a/C5a1/C5a2Family
D [auth E]IPR000826Formyl peptide receptor-relatedFamily
D [auth E]IPR000276G protein-coupled receptor, rhodopsin-likeFamily
D [auth E]IPR001644C3a anaphylatoxin chemotactic receptorFamily
D [auth E]IPR017452GPCR, rhodopsin-like, 7TMDomain
D [auth E]IPR001432Muscarinic acetylcholine receptor M4Family
D [auth E]IPR000995Muscarinic acetylcholine receptor familyFamily
D [auth E]IPR000276G protein-coupled receptor, rhodopsin-likeFamily
D [auth E]IPR017452GPCR, rhodopsin-like, 7TMDomain
E [auth G]IPR001770G-protein, gamma subunitFamily
E [auth G]IPR015898G-protein, gamma subunit-like domainDomain
E [auth G]IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP09471
PharosP62873
D [auth E]PharosP08173
E [auth G]PharosP59768