| I [auth SH] | IPR000554 | Small ribosomal subunit protein eS7 | Family |
| I [auth SH] | IPR047861 | Small ribosomal subunit protein eS7, conserved site | Conserved Site |
| H [auth SG] | IPR018282 | Small ribosomal subunit protein eS6, conserved site | Conserved Site |
| H [auth SG] | IPR001377 | Small ribosomal subunit protein eS6 | Family |
| H [auth SG] | IPR014401 | Small ribosomal subunit protein eS6-like | Family |
| G [auth SF] | IPR023798 | Small ribosomal subunit protein uS7 domain | Domain |
| G [auth SF] | IPR020606 | Small ribosomal subunit protein uS7, conserved site | Conserved Site |
| G [auth SF] | IPR036823 | Small ribosomal subunit protein uS7 domain superfamily | Homologous Superfamily |
| G [auth SF] | IPR000235 | Small ribosomal subunit protein uS7 | Family |
| G [auth SF] | IPR005716 | Ribosomal protein uS7, eukaryotic/archaeal | Family |
| F [auth SE] | IPR013843 | Small ribosomal subunit protein eS4, N-terminal | Domain |
| F [auth SE] | IPR032277 | Small ribosomal subunit protein eS4, C-terminal domain | Domain |
| F [auth SE] | IPR013845 | Small ribosomal subunit protein eS4, central region | Domain |
| F [auth SE] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| F [auth SE] | IPR041982 | Small ribosomal subunit protein eS4, KOW domain | Domain |
| F [auth SE] | IPR018199 | Small ribosomal subunit protein eS4, N-terminal, conserved site | Conserved Site |
| F [auth SE] | IPR002942 | RNA-binding S4 domain | Domain |
| F [auth SE] | IPR000876 | Small ribosomal subunit protein eS4 | Family |
| F [auth SE] | IPR038237 | Small ribosomal subunit protein eS4, central domain superfamily | Homologous Superfamily |
| F [auth SE] | IPR036986 | RNA-binding S4 domain superfamily | Homologous Superfamily |
| F [auth SE] | IPR005824 | KOW | Domain |
| E [auth SD] | IPR009019 | K homology domain superfamily, prokaryotic type | Homologous Superfamily |
| E [auth SD] | IPR015946 | K homology domain-like, alpha/beta | Homologous Superfamily |
| E [auth SD] | IPR036419 | Ribosomal protein S3, C-terminal domain superfamily | Homologous Superfamily |
| E [auth SD] | IPR005703 | Small ribosomal subunit protein uS3, eukaryota/archaeal | Family |
| E [auth SD] | IPR004044 | K Homology domain, type 2 | Domain |
| E [auth SD] | IPR001351 | Small ribosomal subunit protein uS3, C-terminal | Domain |
| E [auth SD] | IPR018280 | Small ribosomal subunit protein uS3, conserved site | Conserved Site |
| TA [auth 3l] | IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily |
| TA [auth 3l] | IPR000717 | Proteasome component (PCI) domain | Domain |
| TA [auth 3l] | IPR019382 | Translation initiation factor 3 complex subunit L | Family |
| SA [auth 3k] | IPR016024 | Armadillo-type fold | Homologous Superfamily |
| SA [auth 3k] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| SA [auth 3k] | IPR033464 | CSN8/PSMD8/EIF3K | Domain |
| SA [auth 3k] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| SA [auth 3k] | IPR016020 | Translation initiation factor 3, subunit 12, N-terminal, eukaryotic | Homologous Superfamily |
| SA [auth 3k] | IPR000717 | Proteasome component (PCI) domain | Domain |
| SA [auth 3k] | IPR009374 | Eukaryotic translation initiation factor 3 subunit K | Family |
| RA [auth 3d] | IPR007783 | Eukaryotic translation initiation factor 3 subunit D | Family |
| QA [auth 3h] | IPR027524 | Eukaryotic translation initiation factor 3 subunit H | Family |
| QA [auth 3h] | IPR045810 | eIF3h, C-terminal | Domain |
| QA [auth 3h] | IPR050242 | JAMM/MPN+ metalloenzymes, peptidase M67A | Family |
| QA [auth 3h] | IPR037518 | MPN domain | Domain |
| QA [auth 3h] | IPR000555 | JAB1/MPN/MOV34 metalloenzyme domain | Domain |
| PA [auth 3c] | IPR008905 | Eukaryotic translation initiation factor 3 subunit C, N-terminal domain | Domain |
| PA [auth 3c] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| PA [auth 3c] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| PA [auth 3c] | IPR027516 | Eukaryotic translation initiation factor 3 subunit C | Family |
| PA [auth 3c] | IPR000717 | Proteasome component (PCI) domain | Domain |
| OA [auth 3e] | IPR016650 | Eukaryotic translation initiation factor 3 subunit E | Family |
| OA [auth 3e] | IPR019010 | Eukaryotic translation initiation factor 3 subunit E, N-terminal | Domain |
| OA [auth 3e] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| OA [auth 3e] | IPR000717 | Proteasome component (PCI) domain | Domain |
| NA [auth 3a] | IPR027512 | Eukaryotic translation initiation factor 3 subunit A | Family |
| NA [auth 3a] | IPR054711 | eIF3a, PCI domain, TPR-like region | Domain |
| NA [auth 3a] | IPR000717 | Proteasome component (PCI) domain | Domain |
| D [auth SC] | IPR005711 | Small ribosomal subunit protein uS5, eukaryota_archaea | Family |
| D [auth SC] | IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily |
| D [auth SC] | IPR018192 | Small ribosomal subunit protein uS5, N-terminal, conserved site | Conserved Site |
| D [auth SC] | IPR014721 | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Homologous Superfamily |
| D [auth SC] | IPR000851 | Small ribosomal subunit protein uS5 | Family |
| D [auth SC] | IPR005324 | Small ribosomal subunit protein uS5, C-terminal | Domain |
| D [auth SC] | IPR013810 | Small ribosomal subunit protein uS5, N-terminal | Domain |
| MA [auth 3f] | IPR027531 | Eukaryotic translation initiation factor 3 subunit F | Family |
| MA [auth 3f] | IPR024969 | EIF3F/CSN6-like, C-terminal | Domain |
| MA [auth 3f] | IPR037518 | MPN domain | Domain |
| MA [auth 3f] | IPR000555 | JAB1/MPN/MOV34 metalloenzyme domain | Domain |
| LA [auth 3m] | IPR016024 | Armadillo-type fold | Homologous Superfamily |
| LA [auth 3m] | IPR040750 | eIF3 subunit M, C-terminal helix domain | Domain |
| LA [auth 3m] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| LA [auth 3m] | IPR027528 | Eukaryotic translation initiation factor 3 subunit M | Family |
| LA [auth 3m] | IPR045237 | Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7 | Family |
| LA [auth 3m] | IPR000717 | Proteasome component (PCI) domain | Domain |
| IA [auth Ln] | IPR007836 | Large ribosomal subunit protein eS32 | Family |
| HA [auth Sg] | IPR019775 | WD40 repeat, conserved site | Conserved Site |
| HA [auth Sg] | IPR020472 | PAC1/LIS1-like, WD-40 repeat | Repeat |
| HA [auth Sg] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
| HA [auth Sg] | IPR045223 | Small ribosomal subunit protein RACK1-like | Family |
| HA [auth Sg] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| HA [auth Sg] | IPR001680 | WD40 repeat | Repeat |
| GA [auth sh] | IPR019954 | Ubiquitin conserved site | Conserved Site |
| GA [auth sh] | IPR038582 | Small ribosomal subunit protein eS31 eukaryotic superfamily | Homologous Superfamily |
| GA [auth sh] | IPR050158 | Ubiquitin and ubiquitin-like | Family |
| GA [auth sh] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| GA [auth sh] | IPR000626 | Ubiquitin-like domain | Domain |
| GA [auth sh] | IPR002906 | Small ribosomal subunit protein eS31 | Domain |
| GA [auth sh] | IPR019956 | Ubiquitin domain | Domain |
| GA [auth sh] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
| FA [auth Se] | IPR019954 | Ubiquitin conserved site | Conserved Site |
| FA [auth Se] | IPR006846 | Small ribosomal subunit protein eS30 | Family |
| FA [auth Se] | IPR039415 | Ubiquitin-like protein FUBI | Domain |
| FA [auth Se] | IPR000626 | Ubiquitin-like domain | Domain |
| FA [auth Se] | IPR019956 | Ubiquitin domain | Domain |
| FA [auth Se] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
| EA [auth Sd] | IPR018271 | Small ribosomal subunit protein uS14, conserved site | Conserved Site |
| EA [auth Sd] | IPR043140 | Small ribosomal subunit protein uS14 superfamily | Homologous Superfamily |
| EA [auth Sd] | IPR001209 | Small ribosomal subunit protein uS14 | Family |
| EA [auth Sd] | IPR039744 | Small ribosomal subunit protein uS14, eukaryotes/archaea | Family |
| DA [auth Sc] | IPR028626 | Ribosomal protein eS28 conserved site | Conserved Site |
| DA [auth Sc] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| DA [auth Sc] | IPR000289 | Small ribosomal subunit protein eS28 | Family |
| C [auth SB] | IPR001593 | Small ribosomal subunit protein eS1 | Family |
| C [auth SB] | IPR027500 | Small ribosomal subunit protein eS1, eukaryota | Family |
| C [auth SB] | IPR018281 | Small ribosomal subunit protein eS1, conserved site | Conserved Site |
| CA [auth Sb] | IPR023407 | Small ribosomal subunit protein eS27, zinc-binding domain superfamily | Homologous Superfamily |
| CA [auth Sb] | IPR000592 | Small ribosomal subunit protein eS27 | Family |
| CA [auth Sb] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| BA [auth Sa] | IPR047864 | Ribosomal protein eS26, conserved site | Conserved Site |
| BA [auth Sa] | IPR038551 | Ribosomal protein eS26 superfamily | Homologous Superfamily |
| BA [auth Sa] | IPR000892 | Small ribosomal subunit protein eS26 | Family |
| AA [auth SZ] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| AA [auth SZ] | IPR004977 | Small ribosomal subunit protein eS25 | Family |
| Z [auth SY] | IPR053709 | Eukaryotic Ribosomal Protein eS24 | Homologous Superfamily |
| Z [auth SY] | IPR001976 | Small ribosomal subunit protein eS24 | Family |
| Z [auth SY] | IPR012678 | Ribosomal protein uL23/eL15/eS24 core domain superfamily | Homologous Superfamily |
| Z [auth SY] | IPR018098 | Small ribosomal subunit protein eS24 conserved site | Conserved Site |
| Y [auth SX] | IPR006032 | Small ribosomal subunit protein uS12 | Family |
| Y [auth SX] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| Y [auth SX] | IPR005680 | Small ribosomal subunit protein uS12, eukaryota/archaea | Family |
| X [auth SW] | IPR047863 | Small ribosomal subunit protein uS8, conserved site | Conserved Site |
| X [auth SW] | IPR000630 | Small ribosomal subunit protein uS8 | Family |
| X [auth SW] | IPR035987 | Small ribosomal subunit protein uS8 superfamily | Homologous Superfamily |
| W [auth SV] | IPR038579 | Small ribosomal subunit protein eS21 superfamily | Homologous Superfamily |
| W [auth SV] | IPR018279 | Small ribosomal subunit protein eS21, conserved site | Conserved Site |
| W [auth SV] | IPR001931 | Small ribosomal subunit protein eS21 | Family |
| V [auth SU] | IPR027486 | Small ribosomal subunit protein uS10 domain | Domain |
| V [auth SU] | IPR036838 | Small ribosomal subunit protein uS10 domain superfamily | Homologous Superfamily |
| V [auth SU] | IPR005729 | Small ribosomal subunit protein uS10, eukaryotic/archaeal | Family |
| V [auth SU] | IPR018268 | Small ribosomal subunit protein uS10, conserved site | Conserved Site |
| V [auth SU] | IPR001848 | Small ribosomal subunit protein uS10 | Family |
| U [auth ST] | IPR018277 | Small ribosomal subunit protein eS19, conserved site | Conserved Site |
| U [auth ST] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| U [auth ST] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| U [auth ST] | IPR001266 | Small ribosomal subunit protein eS19 | Family |
| T [auth SS] | IPR018269 | Small ribosomal subunit protein uS13, conserved site | Conserved Site |
| T [auth SS] | IPR027437 | Small ribosomal subunit protein uS13, C-terminal | Homologous Superfamily |
| T [auth SS] | IPR001892 | Small ribosomal subunit protein uS13 | Family |
| T [auth SS] | IPR010979 | Small ribosomal subunit protein uS13-like, H2TH | Homologous Superfamily |
| B [auth SA] | IPR023591 | Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily | Homologous Superfamily |
| B [auth SA] | IPR001865 | Small ribosomal subunit protein uS2 | Family |
| B [auth SA] | IPR032281 | Small ribosomal subunit protein uS2, C-terminal domain | Domain |
| B [auth SA] | IPR027498 | Small ribosomal subunit protein uS2, eukaryota | Family |
| B [auth SA] | IPR027504 | Small ribosomal subunit protein uS2, vertebrates | Family |
| B [auth SA] | IPR018130 | Small ribosomal subunit protein uS2, conserved site | Conserved Site |
| B [auth SA] | IPR005707 | Small ribosomal subunit protein uS2, eukaryota/archaea | Family |
| S [auth SR] | IPR001210 | Small ribosomal subunit protein eS17 | Family |
| S [auth SR] | IPR036401 | Small ribosomal subunit protein eS17 superfamily | Homologous Superfamily |
| S [auth SR] | IPR018273 | Small ribosomal subunit protein eS17, conserved site | Conserved Site |
| R [auth SQ] | IPR020574 | Small ribosomal subunit protein uS9, conserved site | Conserved Site |
| R [auth SQ] | IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily |
| R [auth SQ] | IPR000754 | Small ribosomal subunit protein uS9 | Family |
| R [auth SQ] | IPR014721 | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Homologous Superfamily |
| Q [auth SP] | IPR023575 | Small ribosomal subunit protein uS19, superfamily | Homologous Superfamily |
| Q [auth SP] | IPR020934 | Small ribosomal subunit protein uS19, conserved site | Conserved Site |
| Q [auth SP] | IPR002222 | Small ribosomal subunit protein uS19 | Family |
| Q [auth SP] | IPR005713 | Small ribosomal subunit protein uS19, eukaryota/archaea | Family |
| P [auth SO] | IPR036967 | Small ribosomal subunit protein uS11 superfamily | Homologous Superfamily |
| P [auth SO] | IPR018102 | Small ribosomal subunit protein uS11, conserved site | Conserved Site |
| P [auth SO] | IPR001971 | Small ribosomal subunit protein uS11 | Family |
| O [auth SN] | IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily |
| O [auth SN] | IPR000589 | Small ribosomal subunit protein uS15 | Family |
| O [auth SN] | IPR012606 | Small ribosomal subunit protein uS15, N-terminal | Domain |
| O [auth SN] | IPR023029 | Small ribosomal subunit protein uS15, archaea/eukaryota | Family |
| N [auth Sf] | IPR000530 | Small ribosomal subunit protein eS12 | Family |
| N [auth Sf] | IPR004038 | Ribosomal protein eL8/eL30/eS12/Gadd45 | Domain |
| N [auth Sf] | IPR047860 | Small ribosomal subunit protein eS12, conserved site | Conserved Site |
| N [auth Sf] | IPR029064 | Ribosomal protein eL30-like superfamily | Homologous Superfamily |
| M [auth SL] | IPR019979 | Small ribosomal subunit protein uS17, conserved site | Conserved Site |
| M [auth SL] | IPR032440 | Small ribosomal subunit protein uS17, N-terminal | Domain |
| M [auth SL] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| M [auth SL] | IPR000266 | Small ribosomal subunit protein uS17 | Family |
| M [auth SL] | IPR028333 | Small ribosomal subunit protein uS17, archaeal/eukaryotic | Family |
| L [auth SK] | IPR037447 | Small ribosomal subunit protein eS10 | Family |
| L [auth SK] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| L [auth SK] | IPR005326 | Plectin/eS10, N-terminal | Domain |
| K [auth SJ] | IPR005710 | Small ribosomal subunit protein uS4, eukaryota/archaea | Family |
| K [auth SJ] | IPR002942 | RNA-binding S4 domain | Domain |
| K [auth SJ] | IPR022801 | Small ribosomal subunit protein uS4 | Family |
| K [auth SJ] | IPR018079 | Small ribosomal subunit protein uS4, conserved site | Conserved Site |
| K [auth SJ] | IPR001912 | Small ribosomal subunit protein uS4, N-terminal | Domain |
| K [auth SJ] | IPR036986 | RNA-binding S4 domain superfamily | Homologous Superfamily |
| J [auth SI] | IPR022309 | Ribosomal protein eS8/ribosomal biogenesis NSA2 | Family |
| J [auth SI] | IPR018283 | Small ribosomal subunit protein eS8, conserved site | Conserved Site |
| J [auth SI] | IPR001047 | Small ribosomal subunit protein eS8 | Family |
| J [auth SI] | IPR042563 | Small ribosomal subunit protein eS8 subdomain, eukaryota | Homologous Superfamily |
| A [auth 1A] | IPR018104 | Translation initiation factor 1A (eIF-1A), conserved site | Conserved Site |
| A [auth 1A] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| A [auth 1A] | IPR006196 | RNA-binding domain, S1, IF1 type | Domain |
| A [auth 1A] | IPR001253 | Translation initiation factor 1A (eIF-1A) | Family |