9HIG | pdb_00009hig

Cryo-EM composite structure of 70S ribosome of marine cold bacterium Pseudoalteromonas translucida (P. haloplanktis)TAC125.

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Small ribosomal subunit protein uS3
Small ribosomal subunit protein uS4
Small ribosomal subunit protein uS7
Small ribosomal subunit protein uS9
Small ribosomal subunit protein uS11
Small ribosomal subunit protein uS12
Small ribosomal subunit protein uS15
Small ribosomal subunit protein bS18
V [auth W]P-site tRNA-fMet---
AA [auth 1]Large ribosomal subunit protein bL34
CA [auth 3]Large ribosomal subunit protein bL36
FA [auth e]Large ribosomal subunit protein uL4
GA [auth g]Large ribosomal subunit protein uL6
IA [auth i]Large ribosomal subunit protein uL13
KA [auth k]Large ribosomal subunit protein uL15
LA [auth l]Large ribosomal subunit protein uL16
MA [auth m]Large ribosomal subunit protein bL17
NA [auth n]Large ribosomal subunit protein uL18
PA [auth p]Large ribosomal subunit protein bL20
QA [auth q]Large ribosomal subunit protein bL21
SA [auth s]Large ribosomal subunit protein uL23
UA [auth u]Large ribosomal subunit protein bL25
VA [auth v]Large ribosomal subunit protein bL27
YA [auth y]Large ribosomal subunit protein uL30
ZA [auth z]Large ribosomal subunit protein bL32
Small ribosomal subunit protein uS8
Small ribosomal subunit protein bS6
AB [auth f]Large ribosomal subunit protein uL5
XA [auth x]Large ribosomal subunit protein uL29
Small ribosomal subunit protein uS5
WA [auth w]Large ribosomal subunit protein bL28
TA [auth t]Large ribosomal subunit protein uL24
RA [auth r]Large ribosomal subunit protein uL22
OA [auth o]Large ribosomal subunit protein bL19
JA [auth j]Large ribosomal subunit protein uL14
HA [auth h]Large ribosomal subunit protein bL9
EA [auth d]Large ribosomal subunit protein uL3
DA [auth c]Large ribosomal subunit protein uL2
BA [auth 2]Large ribosomal subunit protein bL35
Z [auth 0]Large ribosomal subunit protein bL33
Y [auth b]5S rRNA---
X [auth a]23S rRNA---
W [auth X]mRNA---
Small ribosomal subunit protein bS21
Small ribosomal subunit protein bS20
Small ribosomal subunit protein uS2
Small ribosomal subunit protein uS19
Small ribosomal subunit protein uS17
Small ribosomal subunit protein bS16
Small ribosomal subunit protein uS14
Small ribosomal subunit protein uS13
Small ribosomal subunit protein uS10
16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
IPR057258Small ribosomal subunit protein uS3Family
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
IPR004087K Homology domainDomain
IPR004044K Homology domain, type 2Domain
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IPR002942RNA-binding S4 domainDomain
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IPR022801Small ribosomal subunit protein uS4Family
IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IPR000235Small ribosomal subunit protein uS7Family
IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IPR023798Small ribosomal subunit protein uS7 domainDomain
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR000754Small ribosomal subunit protein uS9Family
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR001971Small ribosomal subunit protein uS11Family
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IPR006032Small ribosomal subunit protein uS12Family
IPR005679Ribosomal protein uS12, bacteriaFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IPR000589Small ribosomal subunit protein uS15Family
IPR001648Small ribosomal subunit protein bS18Family
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
AA [auth 1]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
AA [auth 1]IPR000271Large ribosomal subunit protein bL34Family
CA [auth 3]IPR000473Large ribosomal subunit protein bL36Family
CA [auth 3]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
CA [auth 3]IPR047621Ribosomal protein L36, bacteriaFamily
FA [auth e]IPR013005Large ribosomal subunit protein uL4-likeFamily
FA [auth e]IPR002136Large ribosomal subunit protein uL4Family
FA [auth e]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
GA [auth g]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
GA [auth g]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
GA [auth g]IPR000702Large ribosomal subunit protein uL6-likeFamily
GA [auth g]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
GA [auth g]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
IA [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IA [auth i]IPR005822Large ribosomal subunit protein uL13Family
IA [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
IA [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
KA [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
KA [auth k]IPR030878Large ribosomal subunit protein uL15Family
KA [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
KA [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
LA [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
LA [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
LA [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
LA [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
LA [auth l]IPR047873Large ribosomal subunit protein uL16Family
MA [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
MA [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
MA [auth m]IPR000456Large ribosomal subunit protein bL17Family
NA [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
NA [auth n]IPR057268Large ribosomal subunit protein uL18Family
NA [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
PA [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
PA [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
PA [auth p]IPR005813Large ribosomal subunit protein bL20Family
QA [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
QA [auth q]IPR001787Large ribosomal subunit protein bL21Family
QA [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
QA [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
SA [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
SA [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
SA [auth s]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
SA [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
UA [auth u]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
UA [auth u]IPR001021Ribosomal protein bL25, long-formFamily
UA [auth u]IPR020055Ribosomal protein bL25, short-formFamily
UA [auth u]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
UA [auth u]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
UA [auth u]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
UA [auth u]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
UA [auth u]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
VA [auth v]IPR001684Large ribosomal subunit protein bL27Family
VA [auth v]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
YA [auth y]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
YA [auth y]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
YA [auth y]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
YA [auth y]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
ZA [auth z]IPR002677Large ribosomal subunit protein bL32Family
ZA [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZA [auth z]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
IPR000630Small ribosomal subunit protein uS8Family
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
IPR000529Small ribosomal subunit protein bS6Family
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
AB [auth f]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
AB [auth f]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
AB [auth f]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
AB [auth f]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
AB [auth f]IPR002132Large ribosomal subunit protein uL5Family
AB [auth f]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
XA [auth x]IPR050063Universal ribosomal protein uL29Family
XA [auth x]IPR001854Large ribosomal subunit protein uL29Family
XA [auth x]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
XA [auth x]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
IPR000851Small ribosomal subunit protein uS5Family
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
WA [auth w]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
WA [auth w]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
WA [auth w]IPR026569Large ribosomal subunit protein bL28Family
WA [auth w]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
TA [auth t]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
TA [auth t]IPR003256Large ribosomal subunit protein uL24Family
TA [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
TA [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth t]IPR005824KOWDomain
TA [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
RA [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
RA [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
RA [auth r]IPR001063Large ribosomal subunit protein uL22Family
RA [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
RA [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
OA [auth o]IPR001857Large ribosomal subunit protein bL19Family
OA [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
OA [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
OA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JA [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth j]IPR000218Large ribosomal subunit protein uL14Family
JA [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
JA [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
HA [auth h]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
HA [auth h]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
HA [auth h]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
HA [auth h]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
HA [auth h]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
HA [auth h]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
HA [auth h]IPR000244Large ribosomal subunit protein bL9Family
EA [auth d]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
EA [auth d]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
EA [auth d]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth d]IPR000597Large ribosomal subunit protein uL3Family
DA [auth c]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
DA [auth c]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
DA [auth c]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth c]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
DA [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DA [auth c]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
DA [auth c]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
DA [auth c]IPR002171Large ribosomal subunit protein uL2Family
BA [auth 2]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth 2]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
BA [auth 2]IPR001706Large ribosomal subunit protein bL35Family
BA [auth 2]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
Z [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 0]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth 0]IPR001705Large ribosomal subunit protein bL33Family
Z [auth 0]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
IPR001911Small ribosomal subunit protein bS21Family
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
IPR002583Small ribosomal subunit protein bS20Family
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IPR001865Small ribosomal subunit protein uS2Family
IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
IPR002222Small ribosomal subunit protein uS19Family
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR000266Small ribosomal subunit protein uS17Family
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
IPR000307Small ribosomal subunit protein bS16Family
IPR001209Small ribosomal subunit protein uS14Family
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
IPR001892Small ribosomal subunit protein uS13Family
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
IPR001848Small ribosomal subunit protein uS10Family
IPR027486Small ribosomal subunit protein uS10 domainDomain
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site