9H19 | pdb_00009h19

Cryo-EM structure of RC-dLH complex model I from Gem. groenlandica strain TET16

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], EC [auth AW], GB [auth AK], GC [auth AX], IB [auth AL], KB [auth AM], MA [auth AA], NB [auth AN], OB [auth AO], PA [auth AB], QA [auth AC], RB [auth AP], SB [auth AQ], TA [auth AD], UA [auth AE], VB [auth AR], XA [auth AF], XB [auth AS], YA [auth AG], ZB [auth AT]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
LA [auth C]	PF02276	Photosynthetic reaction centre cytochrome C subunit (CytoC_RC)	Photosynthetic reaction centre cytochrome C subunit	-	Family
IA [auth M]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
HA [auth L]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], EC [auth AW], GB [auth AK], GC [auth AX], IB [auth AL], KB [auth AM], MA [auth AA], NB [auth AN], OB [auth AO], PA [auth AB], QA [auth AC], RB [auth AP], SB [auth AQ], TA [auth AD], UA [auth AE], VB [auth AR], XA [auth AF], XB [auth AS], YA [auth AG], ZB [auth AT]	Light-harvesting protein	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
LA [auth C]	Photosynthetic reaction center cytochrome c subunit	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle
KA [auth K]	reaction centre Hc sub unit	-	-	-
JA [auth H]	reaction centre Ht sub unit	-	-	-
IA [auth M]	Reaction center protein M chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure endomembrane system membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cellular anatomical structure endomembrane system membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
HA [auth L]	Reaction center protein L chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure endomembrane system membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cellular anatomical structure endomembrane system membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
GA [auth S]	reaction centre S sub unit	-	-	-
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	Light-harvesting protein	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], EA [auth Ap], G [auth Ad], I [auth Ae], K [auth Af], M [auth Ag], O [auth Ah], Q [auth Ai], S [auth Aj], U [auth Ak], W [auth Al], Y [auth Am]	Light-harvesting protein	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle intracellular organelle organelle envelope organelle inner membrane cellular anatomical structure intracellular anatomical structure organelle membrane organelle membrane cell periphery plasma membrane plasma membrane light-harvesting complex protein-containing complex intracellular vesicle membrane-bounded organelle intracellular organelle organelle envelope organelle inner membrane cellular anatomical structure intracellular anatomical structure organelle membrane organelle membrane cell periphery plasma membrane plasma membrane light-harvesting complex protein-containing complex intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle cytoplasm vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], EC [auth AW], GB [auth AK], GC [auth AX], IB [auth AL], KB [auth AM], MA [auth AA], NB [auth AN], OB [auth AO], PA [auth AB], QA [auth AC], RB [auth AP], SB [auth AQ], TA [auth AD], UA [auth AE], VB [auth AR], XA [auth AF], XB [auth AS], YA [auth AG], ZB [auth AT]	IPR000066	Antenna complex, alpha/beta subunit	Domain
AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], EC [auth AW], GB [auth AK], GC [auth AX], IB [auth AL], KB [auth AM], MA [auth AA], NB [auth AN], OB [auth AO], PA [auth AB], QA [auth AC], RB [auth AP], SB [auth AQ], TA [auth AD], UA [auth AE], VB [auth AR], XA [auth AF], XB [auth AS], YA [auth AG], ZB [auth AT]	IPR018332	Antenna complex, alpha subunit	Family
AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], AB [auth AH], BC [auth AU], CB [auth AI], CC [auth AV], EB [auth AJ], EC [auth AW], GB [auth AK], GC [auth AX], IB [auth AL], KB [auth AM], MA [auth AA], NB [auth AN], OB [auth AO], PA [auth AB], QA [auth AC], RB [auth AP], SB [auth AQ], TA [auth AD], UA [auth AE], VB [auth AR], XA [auth AF], XB [auth AS], YA [auth AG], ZB [auth AT]	IPR035889	Light-harvesting complex	Homologous Superfamily
LA [auth C]	IPR036280	Multiheme cytochrome superfamily	Homologous Superfamily
LA [auth C]	IPR023119	Multihaem cytochrome, PRC subunit superfamily	Homologous Superfamily
LA [auth C]	IPR003158	Photosynthetic reaction centre, cytochrome c subunit	Family
IA [auth M]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
IA [auth M]	IPR005781	Photosynthetic reaction centre, M subunit	Family
IA [auth M]	IPR000484	Photosynthetic reaction centre, L/M	Family
IA [auth M]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
HA [auth L]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
HA [auth L]	IPR000484	Photosynthetic reaction centre, L/M	Family
HA [auth L]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
HA [auth L]	IPR005871	Photosynthetic reaction centre, L subunit	Family
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	IPR000066	Antenna complex, alpha/beta subunit	Domain
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	IPR023624	Antenna complex, beta domain superfamily	Homologous Superfamily
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	IPR035889	Light-harvesting complex	Homologous Superfamily
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	IPR023623	Antenna complex, beta subunit, conserved site	Conserved Site
AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], AC [auth BU], B [auth Ba], BA [auth Bn], BB [auth BH], D [auth Bb], DA [auth Bo], DB [auth BI], DC [auth BV], F [auth Bc], FA [auth Bp], FB [auth BJ], FC [auth BW], H [auth Bd], HB [auth BK], HC [auth BX], J [auth Be], JB [auth BL], L [auth Bf], LB [auth BM], MB [auth BN], N [auth Bg], NA [auth BA], OA [auth BB], P [auth Bh], PB [auth BO], QB [auth BP], R [auth Bi], RA [auth BC], SA [auth BD], T [auth Bj], TB [auth BQ], UB [auth BR], V [auth Bk], VA [auth BE], WA [auth BF], WB [auth BS], X [auth Bl], YB [auth BT], Z [auth Bm], ZA [auth BG]	IPR002362	Light-harvesting protein B beta chain	Family
A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], EA [auth Ap], G [auth Ad], I [auth Ae], K [auth Af], M [auth Ag], O [auth Ah], Q [auth Ai], S [auth Aj], U [auth Ak], W [auth Al], Y [auth Am]	IPR000066	Antenna complex, alpha/beta subunit	Domain
A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], EA [auth Ap], G [auth Ad], I [auth Ae], K [auth Af], M [auth Ag], O [auth Ah], Q [auth Ai], S [auth Aj], U [auth Ak], W [auth Al], Y [auth Am]	IPR018332	Antenna complex, alpha subunit	Family
A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], EA [auth Ap], G [auth Ad], I [auth Ae], K [auth Af], M [auth Ag], O [auth Ah], Q [auth Ai], S [auth Aj], U [auth Ak], W [auth Al], Y [auth Am]	IPR002361	Antenna complex, alpha subunit conserved site	Conserved Site
A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], A [auth Aa], AA [auth An], C [auth Ab], CA [auth Ao], E [auth Ac], EA [auth Ap], G [auth Ad], I [auth Ae], K [auth Af], M [auth Ag], O [auth Ah], Q [auth Ai], S [auth Aj], U [auth Ak], W [auth Al], Y [auth Am]	IPR035889	Light-harvesting complex	Homologous Superfamily