9GSX | pdb_00009gsx

Campylobacter hook-filament junction-cap complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	Beta-Casp	e9gsxZ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Y	Beta-Casp	e9gsxY1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
X	Beta-Casp	e9gsxX1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
W	V-set	e9gsxW01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: V-set	ECOD (v294.2)
AA [auth a]	Beta-Casp	e9gsxa1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
V	Beta-Casp	e9gsxV1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
U	Beta-Casp	e9gsxU1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
T	Beta-Casp	e9gsxT1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
S	Beta-Casp	e9gsxS1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
R	Beta-Casp	e9gsxR1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Q	Beta-Casp	e9gsxQ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
P	Beta-Casp	e9gsxP1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
O	Beta-Casp	e9gsxO1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
N	Beta-Casp	e9gsxN1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
M	Beta-Casp	e9gsxM1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
L	V-set	e9gsxL01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: V-set	ECOD (v294.2)
K	Beta-Casp	e9gsxK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
J	Beta-Casp	e9gsxJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
I	Beta-Casp	e9gsxI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
H	Beta-Casp	e9gsxH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
G	Beta-Casp	e9gsxG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
F	Beta-Casp	e9gsxF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
E	Beta-Casp	e9gsxE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
D	Beta-Casp	e9gsxD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
C	Beta-Casp	e9gsxC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
B	Beta-Casp	e9gsxB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
A	V-set	e9gsxA01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: V-set	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth a], W, X, Y, Z	PF07196	Flagellin hook IN motif (Flagellin_IN)	Flagellin hook IN motif	-	Motif
AA [auth a], W, X, Y, Z	PF07195	Flagellar hook-associated protein 2 C-terminus (FliD_C)	Flagellar hook-associated protein 2 C-terminus	-	Family
AA [auth a], W, X, Y, Z	PF02465	Flagellar hook-associated protein 2 N-terminus (FliD_N)	Flagellar hook-associated protein 2 N-terminus	-	Family
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	PF00460	Flagella basal body rod protein (Flg_bb_rod)	Flagella basal body rod protein	-	Family
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	PF22638	Flagellar hook-associated protein FlgK helical domain (FlgK_D1)	Flagellar hook-associated protein FlgK helical domain	This entry represents a mainly helical domain found in flagellar hook-associated protein FlgK and related proteins. FlgK is one of three hook associated proteins that form the hook-filament junction. This domain adopts a broken antiparallel helical b ...	This entry represents a mainly helical domain found in flagellar hook-associated protein FlgK and related proteins. FlgK is one of three hook associated proteins that form the hook-filament junction. This domain adopts a broken antiparallel helical bundle comprising six helical segments [1-2].	Domain
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	PF06429	Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)	Flagellar basal body rod FlgEFG protein C-terminal	This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	PF07196	Flagellin hook IN motif (Flagellin_IN)	Flagellin hook IN motif	-	Motif
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	PF07195	Flagellar hook-associated protein 2 C-terminus (FliD_C)	Flagellar hook-associated protein 2 C-terminus	-	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	PF02465	Flagellar hook-associated protein 2 N-terminus (FliD_N)	Flagellar hook-associated protein 2 N-terminus	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth a], W, X, Y, Z	Flagellar hook-associated protein 2	-	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility cell adhesion	bacterial-type flagellum filament cap cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum filament bacterial-type flagellum extracellular region bacterial-type flagellum hook
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	Flagellar hook-associated protein 1	structural molecule activity	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly	cellular anatomical structure extracellular region cell projection bacterial-type flagellum hook organelle membraneless organelle bacterial-type flagellum
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	Flagellin	structural molecule activity	-	cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth a], W, X, Y, Z	IPR040026	Flagellar hook-associated protein 2	Family
AA [auth a], W, X, Y, Z	IPR010809	Flagellar hook-associated protein 2, C-terminal	Domain
AA [auth a], W, X, Y, Z	IPR010810	Flagellin hook, IN motif	Conserved Site
AA [auth a], W, X, Y, Z	IPR003481	Flagellar hook-associated protein 2, N-terminal	Domain
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	IPR002371	Flagellar hook-associated protein 1	Family
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	IPR053927	Flagellar hook-associated protein FlgK, helical domain	Domain
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	IPR010930	Flagellar basal-body/hook protein, C-terminal domain	Domain
L, M, N, O, P L, M, N, O, P, Q, R, S, T, U, V	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	IPR046358	Flagellin, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	IPR001029	Flagellin, N-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K	IPR001492	Flagellin	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.