9G9Z | pdb_00009g9z

Respiratory supercomplex CI1-CIII2-CIV1 (respirasome) from alphaproteobacterium


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NADH-quinone oxidoreductase subunit A -
NADH-quinone oxidoreductase subunit B
NADH-quinone oxidoreductase subunit F - -
NADH-quinone oxidoreductase subunit I
NADH dehydrogenase subunit M
P [auth Q]ETC complex I subunit conserved region-
CA [auth o],
DA [auth p]
Cytochrome c, class I -
EA [auth q]NADH:ubiquinone oxidoreductase 17.2 kD subunit-
NADH-quinone oxidoreductase subunit H
NADH-quinone oxidoreductase
NADH dehydrogenase subunit E -
NADH-quinone oxidoreductase subunit D -
NADH-quinone oxidoreductase subunit C -
BA [auth j]Aa3 type cytochrome c oxidase subunit IV- - -
AA [auth i]cytochrome-c oxidase
Z [auth h]Cytochrome c oxidase subunit 2
Y [auth g]Cytochrome c oxidase subunit 1
U [auth c],
X [auth f]
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
T [auth b],
W [auth e]
Cytochrome c1 -
S [auth a],
V [auth d]
Cytochrome b
R [auth Z]Protein-L-isoaspartate O-methyltransferase
Q [auth R]Zinc finger CHCC-type domain-containing protein- - -
O [auth P]NAD-dependent epimerase/dehydratase - -
NADH-quinone oxidoreductase subunit N
NADH dehydrogenase subunit L
NADH-quinone oxidoreductase subunit K
NADH-quinone oxidoreductase subunit J -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
IPR054765SLBB domainDomain
IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
IPR050837Complex I 51 kDa subunitFamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR010226NADH-quinone oxidoreductase, chain IFamily
IPR003918NADH:ubiquinone oxidoreductaseFamily
IPR010227NADH-quinone oxidoreductase, chain M/4Family
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
P [auth Q]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
P [auth Q]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
CA [auth o],
DA [auth p]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
CA [auth o],
DA [auth p]
IPR009056Cytochrome c-like domainDomain
CA [auth o],
DA [auth p]
IPR002327Cytochrome c, class IA/ IBFamily
EA [auth q]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
IPR006656Molybdopterin oxidoreductaseDomain
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
IPR054351NADH-ubiquinone oxidoreductase, ferredoxin-like domainDomain
IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
IPR050123Prok_molybdopt-oxidoreductaseUnknown
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
IPR042128NuoE domainDomain
IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
IPR001135NADH-quinone oxidoreductase, subunit DDomain
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
IPR010218NADH dehydrogenase, subunit CFamily
BA [auth j]IPR012422Cytochrome c oxidase, subunit IV, bacterial aa3 typeDomain
BA [auth j]IPR036596Bacterial aa3 type cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
AA [auth i]IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
AA [auth i]IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
AA [auth i]IPR000298Cytochrome c oxidase subunit III-likeDomain
AA [auth i]IPR033945Cytochrome c oxidase subunit III domainDomain
AA [auth i]IPR024791Cytochrome c oxidase subunit IIIFamily
Z [auth h]IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
Z [auth h]IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
Z [auth h]IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
Z [auth h]IPR008972CupredoxinHomologous Superfamily
Z [auth h]IPR001505Copper centre Cu(A)Binding Site
Z [auth h]IPR045187Cytochrome c/quinol oxidase subunit IIFamily
Z [auth h]IPR014222Cytochrome c oxidase, subunit IIDomain
Y [auth g]IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
Y [auth g]IPR000883Cytochrome c oxidase subunit IFamily
Y [auth g]IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
Y [auth g]IPR023616Cytochrome c oxidase-like, subunit I domainDomain
Y [auth g]IPR033944Cytochrome c oxidase subunit I domainDomain
Y [auth g]IPR014241Cytochrome c oxidase, subunit I bacterial typeFamily
U [auth c],
X [auth f]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
U [auth c],
X [auth f]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
U [auth c],
X [auth f]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
U [auth c],
X [auth f]
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
U [auth c],
X [auth f]
IPR014349Rieske iron-sulphur proteinFamily
U [auth c],
X [auth f]
IPR019470Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signalDomain
U [auth c],
X [auth f]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
U [auth c],
X [auth f]
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealConserved Site
T [auth b],
W [auth e]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
T [auth b],
W [auth e]
IPR002326Cytochrome c1Family
T [auth b],
W [auth e]
IPR009056Cytochrome c-like domainDomain
S [auth a],
V [auth d]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
S [auth a],
V [auth d]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
S [auth a],
V [auth d]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
S [auth a],
V [auth d]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
S [auth a],
V [auth d]
IPR005798Cytochrome b/b6, C-terminalDomain
S [auth a],
V [auth d]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
S [auth a],
V [auth d]
IPR030689Cytochrome bFamily
S [auth a],
V [auth d]
IPR005797Cytochrome b/b6, N-terminal domainDomain
R [auth Z]IPR000682Protein-L-isoaspartate(D-aspartate) O-methyltransferaseFamily
R [auth Z]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
Q [auth R]IPR019401Zinc finger, CHCC-typeDomain
O [auth P]IPR051207Mitochondrial Complex I NDUFA9 SubunitFamily
O [auth P]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
O [auth P]IPR001509NAD-dependent epimerase/dehydrataseDomain
IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
EA [auth q]FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
2MR Parent Component: ARG

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0067

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0067 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0067 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891