9G6K | pdb_00009g6k

LSU structure derived from the LSU sample of the mitoribosome from T. gondii.

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth L1]	PF08561	Mitochondrial ribosomal protein L37 (Ribosomal_L37)	Mitochondrial ribosomal protein L37	-	Family
H [auth L7]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
I [auth L8]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
J [auth L9]	PF20724	Domain of unknown function (DUF6831) (DUF6831)	Domain of unknown function (DUF6831)	This domain s is functionally uncharacterised. It is predominantly found in eukaryotic sequences mostly from Alveolata. There are several highly conserved motifs, including YxKHxR and WPPE at the C terminus. The domain is predicted to adopt an alpha- ...	This domain s is functionally uncharacterised. It is predominantly found in eukaryotic sequences mostly from Alveolata. There are several highly conserved motifs, including YxKHxR and WPPE at the C terminus. The domain is predicted to adopt an alpha-beta fold.	Domain
J [auth L9]	PF20725	Domain of unknown function (DUF6832) (DUF6832)	Domain of unknown function (DUF6832)	This domain is functionally uncharacterised. It is predominantly found in eukaryotic sequences mostly from Alveolata. There are several highly conserved motifs: FGFNSFWS, FKxxxYD, PRxxY and YRC. Predictions of its structure suggest it folds into seve ...	This domain is functionally uncharacterised. It is predominantly found in eukaryotic sequences mostly from Alveolata. There are several highly conserved motifs: FGFNSFWS, FKxxxYD, PRxxY and YRC. Predictions of its structure suggest it folds into seven alpha helices.	Domain
K [auth LA]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
K [auth LA]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
L [auth LB]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
R [auth LH]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
S [auth LI]	PF09809	Mitochondrial ribosomal protein L27 (MRP-L27)	Mitochondrial ribosomal protein L27	-	Family
T [auth LJ]	PF08373	RAP domain (RAP)	RAP domain	This domain is found in various eukaryotic species, where it is found in proteins that are important in various parasite-host cell interactions. It is thought to be an RNA-binding domain [1]. The domain is involved in plant defence in response to bac ...	This domain is found in various eukaryotic species, where it is found in proteins that are important in various parasite-host cell interactions. It is thought to be an RNA-binding domain [1]. The domain is involved in plant defence in response to bacterial infection [2,3].	Domain
W [auth LM]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
W [auth LM]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
Y [auth LO]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
Y [auth LO]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
Z [auth LP]	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].	Domain
CA [auth LS]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
CA [auth LS]	PF00467	KOW motif (KOW)	KOW motif	-	Family
DA [auth LT]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
EA [auth LU]	PF05046	Mitochondrial large subunit ribosomal protein (Img2) (Img2)	Mitochondrial large subunit ribosomal protein (Img2)	This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].	Domain
GA [auth LW]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
IA [auth LY]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
JA [auth LZ]	PF00076	RNA recognition motif (RRM_1)	RNA recognition motif	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.	Domain
LB [auth UB]	PF01016	Ribosomal L27 protein (Ribosomal_L27)	Ribosomal L27 protein	-	Family
QB [auth UG]	PF00847	AP2 domain (AP2)	AP2 domain	This 60 amino acid residue domain can bind to DNA [2] and is found in transcription factor proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth L0]	RRM domain-containing protein	RNA binding binding nucleic acid binding	-	-
B [auth L1]	Large ribosomal subunit protein mL54	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
C [auth L2]	mL162	-	-	-
D [auth L3]	Ribosomal l25 family protein	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit membrane
E [auth L4]	RAP domain-containing protein	-	-	-
F [auth L5]	mL183	-	-	-
G [auth L6]	uL1m	-	-	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
H [auth L7]	uL14m	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
I [auth L8]	Putative 50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth L9]	DUF6832 domain-containing protein	-	-	-
K [auth LA]	Putative 50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
L [auth LB]	Putative ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
M [auth LC]	Macro domain-containing protein	-	-	-
N [auth LD]	Ribosomal protein L46	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
O [auth LE]	FAS1 domain-containing protein	-	-	-
P [auth LF]	bL36m	-	-	-
Q [auth LG]	Ribosomal protein RPL22	-	-	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
R [auth LH]	Ribosomal protein L9, N-terminal domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
S [auth LI]	Putative 60S ribosomal protein L27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
T [auth LJ]	RAP domain-containing protein	-	-	-
U [auth LK]	BIR protein	-	-	-
V [auth LL]	AMP-dependent synthetase/ligase domain-containing protein	-	-	-
W [auth LM]	Large ribosomal subunit protein uL11m	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
X [auth LN]	bL35m	-	-	-
Y [auth LO]	LSU ribosomal protein L2P, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
Z [auth LP]	Peptidyl-prolyl cis-trans isomerase	amide binding binding cyclosporin A binding isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation	cellular anatomical structure intracellular anatomical structure cytoplasm
AA [auth LQ]	mL175	-	-	-
BA [auth LR]	mL172	-	-	-
CA [auth LS]	Large ribosomal subunit protein uL24c	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
DA [auth LT]	Putative 50S ribosomal protein L33	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
EA [auth LU]	Large ribosomal subunit protein mL49	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
GA [auth LW]	Putative 50S ribosomal protein L3	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
HA [auth LX]	mL176	-	-	-
IA [auth LY]	Ribosomal L22p/L17e protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
JA [auth LZ]	mL174	-	-	-
KA [auth La]	Large ribosomal subunit protein uL23m	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
LA [auth Lb]	RAP domain-containing protein	-	-	-
MA [auth Lc]	RAP domain-containing protein	RNA binding binding nucleic acid binding	regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process regulation of catabolic process gene expression mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound catabolic process regulation of mRNA stability regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of RNA stability nucleic acid catabolic process regulation of mitochondrial mRNA stability metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of mRNA metabolic process regulation of metabolic process mitochondrial gene expression nucleobase-containing compound biosynthetic process RNA biosynthetic process mitochondrial RNA processing nucleic acid biosynthetic process mitochondrial RNA metabolic process RNA processing	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen organelle lumen cytoplasm
NA [auth Ld]	RAP domain-containing protein	RNA binding binding nucleic acid binding	regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process regulation of catabolic process gene expression mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound catabolic process regulation of mRNA stability regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of RNA stability nucleic acid catabolic process regulation of mitochondrial mRNA stability metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of mRNA metabolic process regulation of metabolic process mitochondrial gene expression nucleobase-containing compound biosynthetic process RNA biosynthetic process mitochondrial RNA processing nucleic acid biosynthetic process mitochondrial RNA metabolic process RNA processing	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen organelle lumen cytoplasm
OA [auth Le]	RAP domain-containing protein	-	-	-
PA [auth Lf]	HECT-domain (Ubiquitin-transferase) domain-containing protein	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity ubiquitin-protein transferase activity	-	-
QA [auth Lg]	Large ribosomal subunit protein uL29m	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
RA [auth Lh]	Large ribosomal subunit protein uL4m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
SA [auth Li]	RAP domain-containing protein	-	-	-
TA [auth Lj]	mL177	-	-	-
UA [auth Lk]	AP2 domain transcription factor AP2VIIb-2	-	-	-
WA [auth Lm]	Large ribosomal subunit protein uL24c	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
XA [auth Ln]	mL185	-	-	-
YA [auth Lo]	Transmembrane protein	-	-	cellular anatomical structure membrane
ZA [auth Lp]	bL19m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
AB [auth Lq]	RAP domain-containing protein	-	-	-
BB [auth Lr]	Putative ribosomal protein L28	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
CB [auth Ls]	Ribosomal protein L15, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
DB [auth Lt]	mL40	-	-	-
EB [auth Lu]	mL164	-	-	-
FB [auth Lv]	mL180	-	-	-
GB [auth Lw]	Putative 50S ribosomal protein L16	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
HB [auth Lx]	mL173	-	-	-
IB [auth Ly]	Large ribosomal subunit protein bL21m	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
JB [auth Lz]	mL182	RNA binding binding nucleic acid binding	-	-
KB [auth UA]	mL178	-	-	-
LB [auth UB]	bL27m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
MB [auth UC]	mL179	-	-	-
NB [auth UD]	Transmembrane protein	-	-	cellular anatomical structure membrane
OB [auth UE]	mL53	-	-	-
PB [auth UF]	bL32m	-	-	-
QB [auth UG]	AP2 domain transcription factor AP2IV-1	DNA binding binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
RB [auth UH]	mL181	-	-	-
SB [auth UI]	mL184	-	-	-
TB [auth l0]	RNA23t	-	-	-
UB [auth l1]	RNA29	-	-	-
VB [auth l2]	LSUB	-	-	-
WB [auth l3]	RNA6	-	-	-
XB [auth l4]	RNA1	-	-	-
YB [auth l5]	RNA31	-	-	-
ZB [auth l6]	RNA14	-	-	-
AC [auth l7]	RNA11	-	-	-
BC [auth l8]	RNA36	-	-	-
CC [auth l9]	RNA3	-	-	-
DC [auth lA]	RNA2	-	-	-
EC [auth lB]	RNA38	-	-	-
FC [auth lC]	RNA35	-	-	-
GC [auth lD]	RNA32	-	-	-
HC [auth lE]	RNA15	-	-	-
IC [auth lF]	RNA10	-	-	-
JC [auth lG]	LSUC	-	-	-
KC [auth lH]	RNA16	-	-	-
LC [auth lI]	RNA13	-	-	-
MC [auth lJ]	LSUD/E	-	-	-
NC [auth lK]	SSUF	-	-	-
OC [auth lL]	RNA7	-	-	-
PC [auth lM]	LSUF/G	-	-	-
QC [auth lN]	RNA37	-	-	-
RC [auth lO]	LSUA	-	-	-
SC [auth lP]	ulr1	-	-	-
TC [auth lQ]	ulr2	-	-	-
UC [auth lR]	ulr3	-	-	-
VC [auth lS]	ulr4	-	-	-
WC [auth lT], ZC [auth lW]	ulr5	-	-	-
XC [auth lU]	ulr6	-	-	-
BD [auth lY], YC [auth lV]	ulr7,ulr8	-	-	-
AD [auth lX]	ulr9	-	-	-
VA [auth Ll]	Large ribosomal subunit protein mL43	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
FA [auth LV]	mL148	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth L0]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
A [auth L0]	IPR000504	RNA recognition motif domain	Domain
A [auth L0]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
B [auth L1]	IPR013870	Large ribosomal subunit protein mL54	Family
D [auth L3]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
D [auth L3]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
G [auth L6]	IPR023674	Ribosomal protein uL1-like	Homologous Superfamily
G [auth L6]	IPR028364	Ribosomal protein uL1/ribosomal biogenesis protein	Family
H [auth L7]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
H [auth L7]	IPR000218	Large ribosomal subunit protein uL14	Family
H [auth L7]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
I [auth L8]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
I [auth L8]	IPR000456	Large ribosomal subunit protein bL17	Family
J [auth L9]	IPR049235	Domain of unknown function DUF6832	Domain
K [auth LA]	IPR005822	Large ribosomal subunit protein uL13	Family
K [auth LA]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
K [auth LA]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
L [auth LB]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
L [auth LB]	IPR005813	Large ribosomal subunit protein bL20	Family
M [auth LC]	IPR043472	Macro domain-like	Homologous Superfamily
M [auth LC]	IPR002589	Macro domain	Domain
N [auth LD]	IPR040008	Large ribosomal subunit protein mL46	Family
O [auth LE]	IPR000782	FAS1 domain	Domain
O [auth LE]	IPR036378	FAS1 domain superfamily	Homologous Superfamily
R [auth LH]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
R [auth LH]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
R [auth LH]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
R [auth LH]	IPR000244	Large ribosomal subunit protein bL9	Family
S [auth LI]	IPR019189	Large ribosomal subunit protein mL41	Family
T [auth LJ]	IPR013584	RAP domain	Domain
V [auth LL]	IPR042099	ANL, N-terminal domain	Homologous Superfamily
W [auth LM]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
W [auth LM]	IPR000911	Ribosomal protein uL11	Family
W [auth LM]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
W [auth LM]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
W [auth LM]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
Y [auth LO]	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
Y [auth LO]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
Y [auth LO]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
Y [auth LO]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
Y [auth LO]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
Y [auth LO]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
Y [auth LO]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
Y [auth LO]	IPR002171	Large ribosomal subunit protein uL2	Family
Z [auth LP]	IPR029000	Cyclophilin-like domain superfamily	Homologous Superfamily
Z [auth LP]	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Domain
Z [auth LP]	IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	Conserved Site
CA [auth LS]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
CA [auth LS]	IPR003256	Large ribosomal subunit protein uL24	Family
CA [auth LS]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
CA [auth LS]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
CA [auth LS]	IPR005824	KOW	Domain
CA [auth LS]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
DA [auth LT]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
DA [auth LT]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
DA [auth LT]	IPR001705	Large ribosomal subunit protein bL33	Family
EA [auth LU]	IPR007740	Large ribosomal subunit protein mL49	Family
GA [auth LW]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
GA [auth LW]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
GA [auth LW]	IPR000597	Large ribosomal subunit protein uL3	Family
HA [auth LX]	IPR056349	Microprotein, apicomplexa 10	Family
IA [auth LY]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
KA [auth La]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
KA [auth La]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
KA [auth La]	IPR013025	Large ribosomal subunit protein uL23-like	Family
MA [auth Lc]	IPR050870	FAST kinase domain-containing	Family
MA [auth Lc]	IPR013584	RAP domain	Domain
NA [auth Ld]	IPR050870	FAST kinase domain-containing	Family
NA [auth Ld]	IPR013584	RAP domain	Domain
PA [auth Lf]	IPR000569	HECT domain	Domain
PA [auth Lf]	IPR043366	HECTD4	Family
PA [auth Lf]	IPR035983	HECT, E3 ligase catalytic domain	Homologous Superfamily
QA [auth Lg]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
QA [auth Lg]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
RA [auth Lh]	IPR013005	Large ribosomal subunit protein uL4-like	Family
RA [auth Lh]	IPR002136	Large ribosomal subunit protein uL4	Family
RA [auth Lh]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
SA [auth Li]	IPR013584	RAP domain	Domain
WA [auth Lm]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
WA [auth Lm]	IPR003256	Large ribosomal subunit protein uL24	Family
WA [auth Lm]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
WA [auth Lm]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
WA [auth Lm]	IPR005824	KOW	Domain
WA [auth Lm]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
ZA [auth Lp]	IPR001857	Large ribosomal subunit protein bL19	Family
ZA [auth Lp]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
ZA [auth Lp]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
BB [auth Lr]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
BB [auth Lr]	IPR026569	Large ribosomal subunit protein bL28	Family
BB [auth Lr]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
CB [auth Ls]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
CB [auth Ls]	IPR030878	Large ribosomal subunit protein uL15	Family
CB [auth Ls]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
CB [auth Ls]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
GB [auth Lw]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
GB [auth Lw]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
GB [auth Lw]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
GB [auth Lw]	IPR047873	Large ribosomal subunit protein uL16	Family
IB [auth Ly]	IPR028909	Large ribosomal subunit protein bL21-like	Family
IB [auth Ly]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
JB [auth Lz]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
JB [auth Lz]	IPR000504	RNA recognition motif domain	Domain
JB [auth Lz]	IPR050666	Epithelial Splicing Regulatory	Family
JB [auth Lz]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
KB [auth UA]	IPR056347	Microprotein, apicomplexa 8	Family
LB [auth UB]	IPR001684	Large ribosomal subunit protein bL27	Family
QB [auth UG]	IPR001471	AP2/ERF domain	Domain
VA [auth Ll]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
VA [auth Ll]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
VA [auth Ll]	IPR039927	Large ribosomal subunit protein mL43	Family