Crystal structure of VcSiaP in complex with a VHH antibody (VHH_VcP#1)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth C] | Beta-Casp | e9fvcC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| C [auth H] | e9fvcH01 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| B | Beta-Casp | e9fvcB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| A | Beta-Casp | e9fvcA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03480 | Bacterial extracellular solute-binding protein, family 7 (DctP) | Bacterial extracellular solute-binding protein, family 7 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| C [auth H], D [auth C] | VHH_VcP#2 | - | - | - |
| Sialic acid-binding periplasmic protein SiaP | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR018389 | TRAP transporter solute receptor DctP | Family | |
| IPR038404 | TRAP transporter solute receptor DctP superfamily | Homologous Superfamily | |
| IPR004682 | TRAP transporter solute receptor, DctP family | Family |
