9EPR | pdb_00009epr

Cryo-EM Structure of Jumping Spider Rhodopsin-1 bound to a Gi heterotrimer


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091144 3000473 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like 8042849 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRas-like P-loop GTPases 8056779 3002022 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth R]Kumopsin1
C [auth G]Guanine nucleotide-binding protein G(T) subunit gamma-T1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Guanine nucleotide-binding protein G(i) subunit alpha-1