Structure of concanavalin A (ConA) dimer from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one ConA dimer. Type II interface between GluK2 ligand-binding domain and ConA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B [auth F] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8073922 | 3000120 | SCOP2B (2022-06-29) |
| A [auth E] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8073922 | 3000120 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth F] | WD40 | e9b33F1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| A [auth E] | WD40 | e9b33E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth E], B [auth F] | Concanavalin V |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth E], B [auth F] | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily |
| A [auth E], B [auth F] | IPR001220 | Legume lectin domain | Domain |
| A [auth E], B [auth F] | IPR000985 | Legume lectin, alpha chain, conserved site | Conserved Site |
| A [auth E], B [auth F] | IPR050258 | Leguminous Lectin | Family |
| A [auth E], B [auth F] | IPR019825 | Legume lectin, beta chain, Mn/Ca-binding site | Binding Site |
