8ZP8 | pdb_00008zp8

Respirasome open state 1 in presence of metformin(SC-MetO1)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
AB [auth QF]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068573 3000806 SCOP2B (2022-06-29)
LB [auth Qf]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068573 3000806 SCOP2B (2022-06-29)
RB [auth S2]SCOP2B SuperfamilyHydB/Nqo4-like 8106814 3001849 SCOP2B (2022-06-29)
ZB [auth V2]SCOP2B SuperfamilyThioredoxin-like 8106790 3000031 SCOP2B (2022-06-29)
VB [auth S6]SCOP2B SuperfamilyRubredoxin-like 8091048 3001257 SCOP2B (2022-06-29)
DB [auth QI]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068583 3000779 SCOP2B (2022-06-29)
OB [auth Qi]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068583 3000779 SCOP2B (2022-06-29)
RA [auth N3]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8106932 3002200 SCOP2B (2022-06-29)
PA [auth N1]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054145 3002280 SCOP2B (2022-06-29)
B [auth 5A]SCOP2B SuperfamilyCytochrome c oxidase subunit E 8097744 3001402 SCOP2B (2022-06-29)
L [auth A2]SCOP2B SuperfamilyThioredoxin-like 8065219 3000031 SCOP2B (2022-06-29)
A [auth 4L]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8098766 3002200 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth 6A]PF02046Cytochrome c oxidase subunit VIa (COX6A)Cytochrome c oxidase subunit VIa- Family
W [auth AM]PF05071NADH ubiquinone oxidoreductase subunit NDUFA12 (NDUFA12)NADH ubiquinone oxidoreductase subunit NDUFA12- Family
CA [auth B5]PF09781NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit (NDUF_B5)NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit- Family
OA [auth CB]PF06374NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) (NDUF_C2)NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2)- Family
UA [auth N6]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
AB [auth QF],
LB [auth Qf]		PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.
Domain
XB [auth S8]PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
I [auth 7C]PF02935Cytochrome c oxidase subunit VIIc (COX7C)Cytochrome c oxidase subunit VIIc- Family
H [auth 7B]PF05392Cytochrome C oxidase chain VIIB (COX7B)Cytochrome C oxidase chain VIIB- Family
G [auth 7A]PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
ZB [auth V2]PF01257Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)Thioredoxin-like [2Fe-2S] ferredoxin- Family
YB [auth V1]PF22461SLBB domain (SLBB_2)SLBB domainThis entry represents a set of SLBB domains [5]. Domain
YB [auth V1]PF01512Nuo51 FMN-binding domain (Complex1_51K)Nuo51 FMN-binding domainThis entry represents the FMN-binding domain of NADH-ubiquinone oxidoreductase 51kDa subunit from NADH:ubiquinone oxidoreductase. Domain
YB [auth V1]PF10589NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S)NADH-ubiquinone oxidoreductase-F iron-sulfur binding regionDomain
WB [auth S7]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunitDomain
VB [auth S6]PF10276Zinc-finger domain (zf-CHCC)Zinc-finger domainThis is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C. Domain
UB [auth S5]PF10200NADH:ubiquinone oxidoreductase, NDUFS5-15kDa (Ndufs5)NADH:ubiquinone oxidoreductase, NDUFS5-15kDa- Family
TB [auth S4]PF04800NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4)NADH dehydrogenase ubiquinone Fe-S protein 4- Family
F [auth 6C]PF02937Cytochrome c oxidase subunit VIc (COX6C)Cytochrome c oxidase subunit VIc- Family
SB [auth S3]PF00329Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)Respiratory-chain NADH dehydrogenase, 30 Kd subunitDomain
QB [auth S1]PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductaseDomain
QB [auth S1]PF22151NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain (Fer4_NDSU1)NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domainThis entry represents the 4Fe-4S domain of NADH-ubiquinone oxidoreductase NDUFS1 from mammals and NuoG from bacteria, which are part of respiratory chain complex I [1-5]. Domain
QB [auth S1]PF09326NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C)NADH-ubiquinone oxidoreductase subunit G, C-terminal- Family
QB [auth S1]PF135102Fe-2S iron-sulfur cluster binding domain (Fer2_4)2Fe-2S iron-sulfur cluster binding domainThe 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. Th ...The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Domain
QB [auth S1]PF22117NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain (Fer4_Nqo3)NADH-quinone oxidoreductase subunit 3, ferredoxin-like domainNADH-quinone oxidoreductase subunit 3 (Nqo3) is a component of respiratory complex I. This protein is located at the peripheral arm of the complex and consists of multiple domains. This entry represents the second ferredoxin-like domain which contain ...NADH-quinone oxidoreductase subunit 3 (Nqo3) is a component of respiratory complex I. This protein is located at the peripheral arm of the complex and consists of multiple domains. This entry represents the second ferredoxin-like domain which contains Fe4-S4 cluster, one of the redox centers of the complex [1-5].
Domain
QB [auth S1]PF10588NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3)NADH-ubiquinone oxidoreductase-G iron-sulfur binding regionDomain
DB [auth QI],
OB [auth Qi]		PF05365Cytochrome b-c1 complex subunit 9 (UCR_UQCRX_QCR9)Cytochrome b-c1 complex subunit 9- Family
CB [auth QH],
NB [auth Qh]		PF02939UcrQ family (UcrQ)UcrQ family- Family
E [auth 6B]PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. Domain
IB [auth Qc],
XA [auth QC]		PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petDDomain
IB [auth Qc],
XA [auth QC]		PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petBDomain
GB [auth Qa],
VA [auth QA]		PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. Domain
GB [auth Qa],
VA [auth QA]		PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
RA [auth N3]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
QA [auth N2]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
QA [auth N2]PF06444NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C)NADH dehydrogenase subunit 2 C-terminusThis family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with Pfam:PF00361. Domain
PA [auth N1]PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
LA [auth C3]PF00510Cytochrome c oxidase subunit III (COX3)Cytochrome c oxidase subunit IIIDomain
KA [auth C2]PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domainDomain
KA [auth C2]PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
JA [auth C1]PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
GA [auth B9]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
FA [auth B8]PF05821NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) (NDUF_B8)NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)- Family
EA [auth B7]PF05676NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7)NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)- Family
C [auth 5B]PF01215Cytochrome c oxidase subunit Vb (COX5B)Cytochrome c oxidase subunit VbDomain
BA [auth B4]PF07225NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) (NDUF_B4)NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)- Family
AA [auth B3]PF08122NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12)NADH-ubiquinone oxidoreductase B12 subunit family- Family
Z [auth B2]PF14813NADH dehydrogenase 1 beta subcomplex subunit 2 (NADH_B2)NADH dehydrogenase 1 beta subcomplex subunit 2- Family
Y [auth B1]PF08040MNLL subunit (NADH_oxidored)MNLL subunit- Family
X [auth AN]PF06212GRIM-19 protein (GRIM-19)GRIM-19 protein- Family
V [auth AL]PF02466Tim17/Tim22/Tim23/Pmp24 family (Tim17)Tim17/Tim22/Tim23/Pmp24 family- Family
U [auth AK]PF01712Deoxynucleoside kinase (dNK)Deoxynucleoside kinaseThis family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the prod ...This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.
Domain
B [auth 5A]PF02284Cytochrome c oxidase subunit Va (COX5A)Cytochrome c oxidase subunit VaCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va. Domain
S [auth AB],
T [auth AC]		PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
R [auth A9]PF01370NAD dependent epimerase/dehydratase family (Epimerase)NAD dependent epimerase/dehydratase family- Family
Q [auth A8]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
O [auth A6]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
M [auth A3]PF14987NADH dehydrogenase 1 alpha subcomplex subunit 3 (NADHdh_A3)NADH dehydrogenase 1 alpha subcomplex subunit 3- Family
L [auth A2]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
K [auth A1]PF15879NADH-ubiquinone oxidoreductase MWFE subunit (MWFE)NADH-ubiquinone oxidoreductase MWFE subunit- Family
A [auth 4L]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth 6A]Cytochrome c oxidase subunit
J [auth 8B]Cytochrome c oxidase subunit 8-
P [auth A7]Complex I-B14.5a-
W [auth AM]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12- -
CA [auth B5]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial- -
IA [auth BL]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial- -
OA [auth CB]NADH dehydrogenase [ubiquinone] 1 subunit C2-
UA [auth N6]NADH-ubiquinone oxidoreductase chain 6
AB [auth QF],
LB [auth Qf]		Cytochrome b-c1 complex subunit 6-
RB [auth S2]Complex I-49kD -
XB [auth S8]NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial -
I [auth 7C]Cytochrome c oxidase subunit 7C, mitochondrial-
H [auth 7B]Cytochrome c oxidase subunit 7B, mitochondrial-
G [auth 7A]Cytochrome c oxidase subunit 7A1, mitochondrial
AC [auth V3]Complex I-9kD- -
ZB [auth V2]NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
YB [auth V1]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
WB [auth S7]NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial - -
VB [auth S6]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-
UB [auth S5]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-
TB [auth S4]NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
F [auth 6C]Cytochrome c oxidase subunit 6C-
SB [auth S3]Complex I-30kD
QB [auth S1]NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
EB [auth QJ],
PB [auth Qj]		Cytochrome b-c1 complex subunit 10-
DB [auth QI],
OB [auth Qi]		Complex III subunit 9-
CB [auth QH],
NB [auth Qh]		Cytochrome b-c1 complex subunit 8-
BB [auth QG],
MB [auth Qg]		Cytochrome b-c1 complex subunit 7-
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		Cytochrome b-c1 complex subunit Rieske, mitochondrial -
JB [auth Qd],
YA [auth QD]		Cytochrome c1, heme protein, mitochondrial -
E [auth 6B]Cytochrome c oxidase subunit- -
IB [auth Qc],
XA [auth QC]		Cytochrome b
HB [auth Qb],
WA [auth QB]		Cytochrome b-c1 complex subunit 1, mitochondrial -
GB [auth Qa],
VA [auth QA]		Cytochrome b-c1 complex subunit 2, mitochondrial
TA [auth N5]NADH-ubiquinone oxidoreductase chain 5
SA [auth N4]NADH-ubiquinone oxidoreductase chain 4
RA [auth N3]NADH-ubiquinone oxidoreductase chain 3
QA [auth N2]NADH-ubiquinone oxidoreductase chain 2
PA [auth N1]NADH-ubiquinone oxidoreductase chain 1
NA [auth CA]NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial- -
MA [auth C4]Cytochrome c oxidase subunit 4-
LA [auth C3]Cytochrome c oxidase subunit 3
KA [auth C2]Cytochrome c oxidase subunit 2
JA [auth C1]Cytochrome c oxidase subunit 1
HA [auth BK]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10- -
GA [auth B9]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-
FA [auth B8]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-
EA [auth B7]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 -
C [auth 5B]Cytochrome c oxidase subunit 5B, mitochondrial
DA [auth B6]Complex I-B17-
BA [auth B4]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4- -
AA [auth B3]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-
Z [auth B2]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial- -
Y [auth B1]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1- -
X [auth AN]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13- -
V [auth AL]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-
U [auth AK]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-
B [auth 5A]Cytochrome c oxidase subunit 5A, mitochondrial
S [auth AB],
T [auth AC]		Acyl carrier protein
R [auth A9]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial- -
Q [auth A8]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-
O [auth A6]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-
N [auth A5]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5---
M [auth A3]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3- -
L [auth A2]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2- -
K [auth A1]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1- -
A [auth 4L]NADH-ubiquinone oxidoreductase chain 4L

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth 6A]IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
D [auth 6A]IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
D [auth 6A]IPR001349Cytochrome c oxidase, subunit VIaFamily
J [auth 8B]IPR003205Cytochrome c oxidase, subunit 8Family
J [auth 8B]IPR036548Cytochrome c oxidase, subunit 8 superfamilyHomologous Superfamily
P [auth A7]IPR009947NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7Family
W [auth AM]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
CA [auth B5]IPR019173NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunitFamily
IA [auth BL]IPR019329NADH:ubiquinone oxidoreductase, ESSS subunitFamily
OA [auth CB]IPR009423NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2Family
UA [auth N6]IPR050269Complex I Subunit 6Family
UA [auth N6]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
UA [auth N6]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
AB [auth QF],
LB [auth Qf]		IPR003422Cytochrome b-c1 complex, subunit 6Family
AB [auth QF],
LB [auth Qf]		IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
AB [auth QF],
LB [auth Qf]		IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
RB [auth S2]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
RB [auth S2]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
RB [auth S2]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
RB [auth S2]IPR001135NADH-quinone oxidoreductase, subunit DDomain
XB [auth S8]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
XB [auth S8]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
XB [auth S8]IPR010226NADH-quinone oxidoreductase, chain IFamily
I [auth 7C]IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
I [auth 7C]IPR004202Cytochrome c oxidase subunit VIIcFamily
H [auth 7B]IPR023272Cytochrome C oxidase, subunit VIIB domain superfamilyHomologous Superfamily
H [auth 7B]IPR008433Cytochrome C oxidase, subunit VIIBFamily
G [auth 7A]IPR003177Cytochrome c oxidase subunit VIIa, metazoaFamily
G [auth 7A]IPR036539Cytochrome c oxidase, subunit VIIa superfamilyHomologous Superfamily
G [auth 7A]IPR039297Cytochrome c oxidase subunit VIIFamily
AC [auth V3]IPR026193NADH-ubiquinone oxidoreductase flavoprotein 3Family
ZB [auth V2]IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
ZB [auth V2]IPR042128NuoE domainDomain
ZB [auth V2]IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
ZB [auth V2]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
YB [auth V1]IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
YB [auth V1]IPR054765SLBB domainDomain
YB [auth V1]IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
YB [auth V1]IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
YB [auth V1]IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
YB [auth V1]IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
YB [auth V1]IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
YB [auth V1]IPR050837Complex I 51 kDa subunitFamily
WB [auth S7]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
WB [auth S7]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
VB [auth S6]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily
VB [auth S6]IPR019401Zinc finger, CHCC-typeDomain
UB [auth S5]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
TB [auth S4]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
TB [auth S4]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
F [auth 6C]IPR037169Mitochondrial cytochrome c oxidase subunit VIc/VIIs superfamilyHomologous Superfamily
F [auth 6C]IPR051389Cytochrome c oxidase subunit VIcFamily
F [auth 6C]IPR034884Mitochondrial cytochrome c oxidase subunit VIc/VIIsFamily
SB [auth S3]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
SB [auth S3]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
SB [auth S3]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
SB [auth S3]IPR010218NADH dehydrogenase, subunit CFamily
QB [auth S1]IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
QB [auth S1]IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
QB [auth S1]IPR006656Molybdopterin oxidoreductaseDomain
QB [auth S1]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
QB [auth S1]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
QB [auth S1]IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
QB [auth S1]IPR054351NADH-ubiquinone oxidoreductase, ferredoxin-like domainDomain
QB [auth S1]IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
QB [auth S1]IPR050123Prok_molybdopt-oxidoreductaseUnknown
QB [auth S1]IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
EB [auth QJ],
PB [auth Qj]		IPR029027Single alpha-helix domain superfamilyHomologous Superfamily
EB [auth QJ],
PB [auth Qj]		IPR015089Cytochrome b-c1 complex subunit 10Family
DB [auth QI],
OB [auth Qi]		IPR008027Cytochrome b-c1 complex subunit 9Family
DB [auth QI],
OB [auth Qi]		IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
CB [auth QH],
NB [auth Qh]		IPR004205Cytochrome b-c1 complex subunit 8Family
CB [auth QH],
NB [auth Qh]		IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
BB [auth QG],
MB [auth Qg]		IPR003197Cytochrome b-c1 complex subunit 7Family
BB [auth QG],
MB [auth Qg]		IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR014349Rieske iron-sulphur proteinFamily
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR005805Rieske iron-sulphur protein, C-terminalDomain
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
FB [auth QK],
KB [auth Qe],
ZA [auth QE]		IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
JB [auth Qd],
YA [auth QD]		IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
JB [auth Qd],
YA [auth QD]		IPR002326Cytochrome c1Family
JB [auth Qd],
YA [auth QD]		IPR009056Cytochrome c-like domainDomain
JB [auth Qd],
YA [auth QD]		IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E [auth 6B]IPR036549Cytochrome c oxidase subunit 6B/Cytochrome c oxidase assembly factor 6-like superfamilyHomologous Superfamily
E [auth 6B]IPR048280Cytochrome oxidase c subunit VIb-likeFamily
E [auth 6B]IPR003213Cytochrome c oxidase, subunit VIbFamily
IB [auth Qc],
XA [auth QC]		IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
IB [auth Qc],
XA [auth QC]		IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
IB [auth Qc],
XA [auth QC]		IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
IB [auth Qc],
XA [auth QC]		IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
IB [auth Qc],
XA [auth QC]		IPR005798Cytochrome b/b6, C-terminalDomain
IB [auth Qc],
XA [auth QC]		IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
IB [auth Qc],
XA [auth QC]		IPR030689Cytochrome bFamily
IB [auth Qc],
XA [auth QC]		IPR005797Cytochrome b/b6, N-terminal domainDomain
HB [auth Qb],
WA [auth QB]		IPR007863Peptidase M16, C-terminalDomain
HB [auth Qb],
WA [auth QB]		IPR011765Peptidase M16, N-terminalDomain
HB [auth Qb],
WA [auth QB]		IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
HB [auth Qb],
WA [auth QB]		IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
GB [auth Qa],
VA [auth QA]		IPR007863Peptidase M16, C-terminalDomain
GB [auth Qa],
VA [auth QA]		IPR011765Peptidase M16, N-terminalDomain
GB [auth Qa],
VA [auth QA]		IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
GB [auth Qa],
VA [auth QA]		IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
GB [auth Qa],
VA [auth QA]		IPR001431Peptidase M16, zinc-binding siteBinding Site
TA [auth N5]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
TA [auth N5]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
TA [auth N5]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
TA [auth N5]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
TA [auth N5]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
SA [auth N4]IPR003918NADH:ubiquinone oxidoreductaseFamily
SA [auth N4]IPR010227NADH-quinone oxidoreductase, chain M/4Family
SA [auth N4]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
SA [auth N4]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
RA [auth N3]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
RA [auth N3]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
QA [auth N2]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
QA [auth N2]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
QA [auth N2]IPR050175Complex I Subunit 2Family
QA [auth N2]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
PA [auth N1]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
PA [auth N1]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
NA [auth CA]IPR026192NADH-ubiquinone oxidoreductase 1 subunit C1Family
MA [auth C4]IPR004203Cytochrome c oxidase subunit IV familyFamily
MA [auth C4]IPR013288Cytochrome c oxidase subunit IVFamily
MA [auth C4]IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
LA [auth C3]IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
LA [auth C3]IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
LA [auth C3]IPR000298Cytochrome c oxidase subunit III-likeDomain
LA [auth C3]IPR033945Cytochrome c oxidase subunit III domainDomain
LA [auth C3]IPR024791Cytochrome c oxidase subunit IIIFamily
KA [auth C2]IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
KA [auth C2]IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
KA [auth C2]IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
KA [auth C2]IPR045187Cytochrome c/quinol oxidase subunit IIFamily
KA [auth C2]IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
KA [auth C2]IPR008972CupredoxinHomologous Superfamily
KA [auth C2]IPR001505Copper centre Cu(A)Binding Site
KA [auth C2]IPR014222Cytochrome c oxidase, subunit IIDomain
JA [auth C1]IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
JA [auth C1]IPR000883Cytochrome c oxidase subunit IFamily
JA [auth C1]IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
JA [auth C1]IPR023616Cytochrome c oxidase-like, subunit I domainDomain
JA [auth C1]IPR033944Cytochrome c oxidase subunit I domainDomain
HA [auth BK]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
HA [auth BK]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
GA [auth B9]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
GA [auth B9]IPR008011Complex 1 LYR protein domainDomain
GA [auth B9]IPR045292NDUFB9, LYR domainDomain
FA [auth B8]IPR008699NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8Family
FA [auth B8]IPR016551NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, metazoaFamily
EA [auth B7]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
C [auth 5B]IPR002124Cytochrome c oxidase, subunit VbFamily
C [auth 5B]IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
DA [auth B6]IPR019174NADH dehydrogenase 1, beta subcomplex, subunit 6Family
BA [auth B4]IPR009866NADH:ubiquinone oxidoreductase, subunit NDUFB4Family
AA [auth B3]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
Z [auth B2]IPR026627NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal typeFamily
Y [auth B1]IPR012575NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1Family
X [auth AN]IPR009346GRIM-19Family
V [auth AL]IPR039205NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11Family
U [auth AK]IPR031314Deoxynucleoside kinase domainDomain
U [auth AK]IPR050566Deoxyribonucleoside KinaseFamily
U [auth AK]IPR015828NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialFamily
U [auth AK]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 5A]IPR003204Cytochrome c oxidase, subunit Va/VIFamily
B [auth 5A]IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
S [auth AB],
T [auth AC]		IPR006162Phosphopantetheine attachment sitePTM
S [auth AB],
T [auth AC]		IPR009081Phosphopantetheine binding ACP domainDomain
S [auth AB],
T [auth AC]		IPR036736ACP-like superfamilyHomologous Superfamily
S [auth AB],
T [auth AC]		IPR003231Acyl carrier proteinFamily
R [auth A9]IPR051207Mitochondrial Complex I NDUFA9 SubunitFamily
R [auth A9]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
R [auth A9]IPR001509NAD-dependent epimerase/dehydrataseDomain
Q [auth A8]IPR010625CHCHDomain
Q [auth A8]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
O [auth A6]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
O [auth A6]IPR008011Complex 1 LYR protein domainDomain
O [auth A6]IPR045299NDUFA6, LYR domainDomain
M [auth A3]IPR026626NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3Family
L [auth A2]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
L [auth A2]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
L [auth A2]IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2Family
K [auth A1]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family
A [auth 4L]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
A [auth 4L]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
RB [auth S2]2MR Parent Component: ARG

RESID:  AA0067

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076