Cryo-EM structure of the integrin avb3 with CWHM-12, conformation 2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | vWA-like | 8055554 | 3000832 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Integrin domains | 8055489 | 3002062 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Integrin alpha N-terminal domain | 8041564 | 3000314 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Integrin domains | 8055305 | 3002062 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | EGF_2 | e8zdfB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: EGF_2 | ECOD (v295.2) |
| A | Integrin_A_Ig_2 | e8zdfA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Integrin_A_Ig_2 | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00362 | Integrin beta chain VWA domain (Integrin_beta) | Integrin beta chain VWA domain | Integrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. | Domain | |
| PF20805 | Integrin alpha Ig-like domain 2 (Integrin_A_Ig_2) | Integrin alpha Ig-like domain 2 | This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. | Domain | |
| PF01839 | FG-GAP repeat (FG-GAP) | FG-GAP repeat | - | Repeat | |
| PF08441 | Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1) | Integrin alpha Ig-like domain 1 | This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. | Domain |