8YGD | pdb_00008ygd

Rhodobacter blasticus RC-LH1 dimer


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
T [auth M]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
S [auth L]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
O [auth H]PF03967Photosynthetic reaction centre, H-chain N-terminal region (PRCH)Photosynthetic reaction centre, H-chain N-terminal region- Family
O [auth H]PF05239PRC-barrel domain (PRC)PRC-barrel domainThe PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].
Domain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunitDomain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunitDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
EA [auth X]1-deoxy-D-xylulose-5-phosphate synthase- -
T [auth M]Reaction center protein M chain
S [auth L]Reaction center protein L chain
O [auth H]Photosynthetic reaction center subunit H-
Antenna pigment protein alpha chain
Antenna pigment protein beta chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
EA [auth X]IPR020169Intrinsic membrane protein family, PufXFamily
T [auth M]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
T [auth M]IPR005781Photosynthetic reaction centre, M subunitFamily
T [auth M]IPR000484Photosynthetic reaction centre, L/MFamily
T [auth M]IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
S [auth L]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
S [auth L]IPR000484Photosynthetic reaction centre, L/MFamily
S [auth L]IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
S [auth L]IPR005871Photosynthetic reaction centre, L subunitFamily
O [auth H]IPR014747Bacterial photosynthetic reaction centre, H-chain, C-terminalHomologous Superfamily
O [auth H]IPR015810Photosynthetic reaction centre, H subunit, N-terminalDomain
O [auth H]IPR005652Photosynthetic reaction centre, H subunitFamily
O [auth H]IPR037097Photosynthetic reaction centre, H subunit, N-terminal domain superfamilyHomologous Superfamily
O [auth H]IPR011033PRC-barrel-like superfamilyHomologous Superfamily
O [auth H]IPR027275PRC-barrel domainDomain
IPR000066Antenna complex, alpha/beta subunitDomain
IPR018332Antenna complex, alpha subunitFamily
IPR035889Light-harvesting complexHomologous Superfamily
IPR000066Antenna complex, alpha/beta subunitDomain
IPR023624Antenna complex, beta domain superfamilyHomologous Superfamily
IPR035889Light-harvesting complexHomologous Superfamily
IPR023623Antenna complex, beta subunit, conserved siteConserved Site
IPR002362Light-harvesting protein B beta chainFamily