8YEF | pdb_00008yef

HPV6 L1 pentamer in complex with Fab F5-77

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyGroup I dsDNA viruses 8094018 3000939 SCOP2B (2022-06-29)
D [auth H]SCOP2B SuperfamilyGroup I dsDNA viruses 8094018 3000939 SCOP2B (2022-06-29)
E [auth I]SCOP2B SuperfamilyGroup I dsDNA viruses 8094018 3000939 SCOP2B (2022-06-29)
F [auth J]SCOP2B SuperfamilyGroup I dsDNA viruses 8094018 3000939 SCOP2B (2022-06-29)
G [auth K]SCOP2B SuperfamilyGroup I dsDNA viruses 8094018 3000939 SCOP2B (2022-06-29)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Heavy ChainIGHV1 -major capsid protein l1 | major capsid protein l1 | major capsid protein l1 | major capsid protein l1SAbDab (2026-02-06)
Light ChainIGKV1 Kappamajor capsid protein l1 | major capsid protein l1 | major capsid protein l1 | major capsid protein l1SAbDab (2026-02-06)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Heavy chain of F5-77---
Light chain of F5-77---
C,
D [auth H],
E [auth I],
F [auth J],
G [auth K]		Major capsid protein L1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C,
D [auth H],
E [auth I],
F [auth J],
G [auth K]		IPR036973Major capsid L1 (late) superfamily, PapillomavirusHomologous Superfamily
C,
D [auth H],
E [auth I],
F [auth J],
G [auth K]		IPR011222Double-stranded DNA virus, group I, capsidHomologous Superfamily
C,
D [auth H],
E [auth I],
F [auth J],
G [auth K]		IPR002210Major capsid L1 (late) protein, PapillomavirusFamily