Annotations: 8XTT

Nuclear receptor Nor1 ligand binding domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e8xttA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00104	Ligand-binding domain of nuclear hormone receptor (Hormone_recep)	Ligand-binding domain of nuclear hormone receptor	This all helical domain is involved in binding the hormone in these receptors.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nuclear receptor subfamily 4 group A member 3	transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding nuclear receptor binding protein binding binding nuclear glucocorticoid receptor binding DNA-binding transcription factor binding DNA binding sequence-specific DNA binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding nuclear receptor binding protein binding binding nuclear glucocorticoid receptor binding DNA-binding transcription factor binding DNA binding sequence-specific DNA binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding cAMP response element binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity nuclear receptor activity molecular transducer activity signaling receptor activity ligand-modulated transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity nuclear steroid receptor activity identical protein binding protein homodimerization activity protein dimerization activity kinase binding enzyme binding protein kinase binding transcription coregulator binding transcription coactivator binding histone acetyltransferase binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation regulation of type B pancreatic cell proliferation type B pancreatic cell proliferation biological regulation cellular process regulation of epithelial cell proliferation epithelial cell proliferation regulation of smooth muscle cell proliferation muscle cell proliferation smooth muscle cell proliferation RNA metabolic process regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation regulation of type B pancreatic cell proliferation type B pancreatic cell proliferation biological regulation cellular process regulation of epithelial cell proliferation epithelial cell proliferation regulation of smooth muscle cell proliferation muscle cell proliferation smooth muscle cell proliferation RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process cellular response to stimulus cell surface receptor signaling pathway response to stimulus signaling platelet-derived growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway cell communication signal transduction enzyme-linked receptor protein signaling pathway response to endogenous stimulus cellular response to leptin stimulus cellular response to endogenous stimulus cellular response to chemical stimulus response to hormone response to chemical response to leptin cellular response to hormone stimulus multicellular organismal process regulation of immune effector process positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of myeloid leukocyte cytokine production involved in immune response cytokine production regulation of cytokine production mast cell cytokine production positive regulation of immune effector process regulation of immune system process positive regulation of macromolecule metabolic process regulation of multicellular organismal process myeloid leukocyte cytokine production cytokine production involved in immune response positive regulation of immune system process positive regulation of cellular process production of molecular mediator of immune response regulation of biosynthetic process regulation of cytokine production involved in immune response regulation of mast cell cytokine production immune response regulation of macromolecule metabolic process immune effector process regulation of gene expression positive regulation of gene expression immune system process positive regulation of cytokine production involved in immune response positive regulation of production of molecular mediator of immune response positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process regulation of production of molecular mediator of immune response positive regulation of cytokine production positive regulation of mast cell cytokine production regulation of metabolic process developmental process fat cell differentiation cellular developmental process cell differentiation muscle hypertrophy regulation of muscle adaptation system process positive regulation of cardiac muscle hypertrophy regulation of system process striated muscle hypertrophy regulation of muscle system process muscle system process regulation of cardiac muscle hypertrophy regulation of muscle hypertrophy muscle adaptation regulation of response to stimulus positive regulation of muscle hypertrophy cardiac muscle hypertrophy positive regulation of cell population proliferation positive regulation of smooth muscle cell proliferation positive regulation of feeding behavior feeding behavior regulation of behavior behavior positive regulation of behavior regulation of feeding behavior common myeloid progenitor cell proliferation negative regulation of biological process regulation of primary metabolic process negative regulation of RNA biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process cellular response to nitrogen compound response to corticotropin-releasing hormone response to peptide hormone cellular response to peptide hormone stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to corticotropin-releasing hormone stimulus immune response-regulating cell surface receptor signaling pathway positive regulation of mast cell activation regulation of leukocyte activation regulation of cell activation myeloid leukocyte activation leukocyte activation positive regulation of response to stimulus positive regulation of cell activation immune response-activating signaling pathway Fc receptor signaling pathway immune response-regulating signaling pathway positive regulation of immune response positive regulation of leukocyte activation mast cell activation regulation of mast cell activation positive regulation of mast cell activation by Fc-epsilon receptor signaling pathway immune response-activating cell surface receptor signaling pathway cell activation Fc receptor mediated stimulatory signaling pathway Fc-epsilon receptor signaling pathway regulation of immune response activation of immune response multicellular organism development anatomical structure morphogenesis embryonic morphogenesis anatomical structure development embryo development animal gross anatomical part developmental process gastrulation regulation of defense response regulation of response to external stimulus negative regulation of inflammatory response defense response negative regulation of response to stimulus response to external stimulus regulation of inflammatory response response to stress negative regulation of response to external stimulus regulation of response to stress negative regulation of defense response inflammatory response regulation of vascular associated smooth muscle cell proliferation positive regulation of vascular associated smooth muscle cell proliferation vascular associated smooth muscle cell proliferation multicellular organismal-level homeostasis homeostatic process energy homeostasis positive regulation of epithelial cell proliferation regulation of vascular associated smooth muscle cell migration positive regulation of locomotion vascular associated smooth muscle cell migration regulation of cell motility regulation of smooth muscle cell migration positive regulation of smooth muscle cell migration positive regulation of cell migration smooth muscle cell migration muscle cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion positive regulation of vascular associated smooth muscle cell migration establishment of organelle localization regulated exocytosis cellular localization transport cell activation involved in immune response leukocyte degranulation myeloid leukocyte mediated immunity vesicle-mediated transport localization secretion by cell organelle localization leukocyte activation involved in immune response establishment of localization in cell leukocyte mediated immunity mast cell mediated immunity secretion vacuolar localization export from cell mast cell degranulation establishment of localization myeloid cell activation involved in immune response mast cell activation involved in immune response exocytosis lysosome localization positive regulation of cell adhesion regulation of cell adhesion positive regulation of monocyte aggregation positive regulation of leukocyte cell-cell adhesion leukocyte cell-cell adhesion leukocyte aggregation positive regulation of cell-cell adhesion monocyte aggregation cell adhesion cell-cell adhesion regulation of leukocyte cell-cell adhesion regulation of cell-cell adhesion regulation of monocyte aggregation intracellular signal transduction response to monoamine cellular response to monoamine stimulus response to catecholamine cellular response to catecholamine stimulus regulation of localization hexose transmembrane transport regulation of transport carbohydrate transport positive regulation of D-glucose transmembrane transport transmembrane transport regulation of transmembrane transport positive regulation of transport D-glucose transmembrane transport positive regulation of transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport cellular respiration energy derivation by oxidation of organic compounds generation of precursor metabolites and energy	protein-containing complex transcription regulator complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle protein-containing complex transcription regulator complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001628	Zinc finger, nuclear hormone receptor-type	Domain
A	IPR003072	Nuclear receptor subfamily 4 group A member 3	Family
A	IPR013088	Zinc finger, NHR/GATA-type	Homologous Superfamily
A	IPR003070	Nuclear receptor subfamily 4 group A member 1-3	Family
A	IPR001723	Nuclear hormone receptor	Family
A	IPR000536	Nuclear hormone receptor, ligand-binding domain	Domain
A	IPR035500	Nuclear hormone receptor-like domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8XTT | pdb_00008xtt

Nuclear receptor Nor1 ligand binding domain

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage