8X35

Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01255	Putative undecaprenyl diphosphate synthase (Prenyltransf)	Putative undecaprenyl diphosphate synthase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Neryl diphosphate synthase 1	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding polyprenyltransferase activity prenyltransferase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity dimethylallylcistransferase activity dehydrodolichyl diphosphate synthase activity	membrane organization cellular component organization plastid membrane organization organelle organization plastid organization cellular process cellular component organization or biogenesis response to stimulus response to stress response to abiotic stimulus response to cold response to temperature stimulus polyprenol metabolic process polyprenol biosynthetic process membrane organization cellular component organization plastid membrane organization organelle organization plastid organization cellular process cellular component organization or biogenesis response to stimulus response to stress response to abiotic stimulus response to cold response to temperature stimulus polyprenol metabolic process polyprenol biosynthetic process small molecule biosynthetic process isoprenoid biosynthetic process cellular biosynthetic process organic hydroxy compound metabolic process cellular metabolic process lipid biosynthetic process alcohol metabolic process primary metabolic process organic substance metabolic process biosynthetic process organic hydroxy compound biosynthetic process cellular lipid metabolic process alcohol biosynthetic process organic substance biosynthetic process small molecule metabolic process metabolic process isoprenoid metabolic process lipid metabolic process	membrane-bounded organelle intracellular anatomical structure plastid cellular anatomical entity intracellular membrane-bounded organelle intracellular organelle plastid stroma organelle chloroplast stroma cytoplasm chloroplast

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR001441	Decaprenyl diphosphate synthase-like	Family
A, B	IPR018520	Di-trans-poly-cis-decaprenylcistransferase-like, conserved site	Conserved Site
A, B	IPR036424	Decaprenyl diphosphate synthase-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.