8WLP | pdb_00008wlp

Cryo-EM structure of the distal rod-hook within the flagellar motor-hook complex in the CCW state.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Z [auth ZP]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
Y [auth ZO]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
X [auth ZN]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
W [auth ZM]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
V [auth ZL]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
U [auth ZK]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
T [auth ZJ]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
S [auth ZI]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
RA [auth Zh]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
R [auth ZH]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
QA [auth Zg]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
Q [auth ZG]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
PA [auth Zf]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
P [auth ZF]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
OA [auth Ze]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
NA [auth Zd]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
MA [auth Zc]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
LA [auth Zb]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
KA [auth Za]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
JA [auth ZZ]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
IA [auth ZY]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
HA [auth ZX]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
GA [auth ZW]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
FA [auth ZV]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
EA [auth ZU]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
DA [auth ZT]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
CA [auth ZS]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
BA [auth ZR]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
AA [auth ZQ]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth ZP]e8wlpZP1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Y [auth ZO]e8wlpZO1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
X [auth ZN]e8wlpZN1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
W [auth ZM]e8wlpZM1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
V [auth ZL]e8wlpZL1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
U [auth ZK]e8wlpZK1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
T [auth ZJ]e8wlpZJ1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
S [auth ZI]e8wlpZI1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
RA [auth Zh]e8wlpZh1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
R [auth ZH]e8wlpZH1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
QA [auth Zg]e8wlpZg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Q [auth ZG]e8wlpZG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
PA [auth Zf]e8wlpZf1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
P [auth ZF]e8wlpZF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
OA [auth Ze]e8wlpZe1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
NA [auth Zd]e8wlpZd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
MA [auth Zc]e8wlpZc1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
LA [auth Zb]e8wlpZb1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
KA [auth Za]e8wlpZa1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
JA [auth ZZ]e8wlpZZ1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
IA [auth ZY]e8wlpZY1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
HA [auth ZX]e8wlpZX1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
GA [auth ZW]e8wlpZW1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
FA [auth ZV]e8wlpZV1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
EA [auth ZU]e8wlpZU1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
DA [auth ZT]e8wlpZT1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
CA [auth ZS]e8wlpZS1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
BA [auth ZR]e8wlpZR1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
AA [auth ZQ]e8wlpZQ1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
ZA [auth y]e8wlpy1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
YA [auth x]e8wlpx1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
XA [auth w]e8wlpw1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
WA [auth v]e8wlpv1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
VA [auth u]e8wlpu1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
UA [auth t]e8wlpt1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
TA [auth s]e8wlps1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
SA [auth r]e8wlpr1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
O [auth ZE]e8wlpZE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
N [auth ZD]e8wlpZD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
M [auth ZC]e8wlpZC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
L [auth ZB]e8wlpZB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
K [auth ZA]e8wlpZA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
J [auth 9]e8wlp91 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
I [auth 8]e8wlp81 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
H [auth 7]e8wlp71 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
G [auth 6]e8wlp61 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
F [auth 5]e8wlp51 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
E [auth 4]e8wlp41 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
D [auth 3]e8wlp31 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
C [auth 2]e8wlp21 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
B [auth 1]e8wlp11 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
AB [auth z]e8wlpz1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
A [auth 0]e8wlp01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22692Flagellar hook protein FlgE/F/G D1 domain (LlgE_F_G_D1)Flagellar hook protein FlgE/F/G D1 domainThis entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular ...This entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular structure that connects the flagellar motor to the long filament acting as a helical propeller.
Domain
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. Domain
PF07559Flagellar basal body protein FlaE D2 domain (FlgE_D2)Flagellar basal body protein FlaE D2 domainThis entry consists of several bacterial FlaE flagellar proteins. These proteins are part of the flagellar basal body rod complex. FlgE comprises two domains, D1 and D2, this entry represents D2, a flattened, eight-strand beta-barrel with significan ...This entry consists of several bacterial FlaE flagellar proteins. These proteins are part of the flagellar basal body rod complex. FlgE comprises two domains, D1 and D2, this entry represents D2, a flattened, eight-strand beta-barrel with significant irregularity and extra loops [1,2].
Domain
PF22692Flagellar hook protein FlgE/F/G D1 domain (LlgE_F_G_D1)Flagellar hook protein FlgE/F/G D1 domainThis entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular ...This entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular structure that connects the flagellar motor to the long filament acting as a helical propeller.
Domain
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. Domain
PF07559Flagellar basal body protein FlaE D2 domain (FlgE_D2)Flagellar basal body protein FlaE D2 domainThis entry consists of several bacterial FlaE flagellar proteins. These proteins are part of the flagellar basal body rod complex. FlgE comprises two domains, D1 and D2, this entry represents D2, a flattened, eight-strand beta-barrel with significan ...This entry consists of several bacterial FlaE flagellar proteins. These proteins are part of the flagellar basal body rod complex. FlgE comprises two domains, D1 and D2, this entry represents D2, a flattened, eight-strand beta-barrel with significant irregularity and extra loops [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellar hook protein FlgE-
Flagellar basal-body rod protein FlgG-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011491Flagellar hook protein FlgE, D2 domainDomain
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR053967Flagellar hook protein FlgE/F/G-like, D1 domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR037058Flagellar hook protein FlgE superfamilyHomologous Superfamily
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR012834Flagellar basal-body rod FlgGFamily
IPR053967Flagellar hook protein FlgE/F/G-like, D1 domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily