8VSD | pdb_00008vsd

avb8/L-TGF-b1/GARP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth E]SCOP2B SuperfamilyCystine-knot cytokines 8038779 3000846 SCOP2B (2022-06-29)
D [auth E]SCOP2B Superfamilypro-TGF beta-like 8089966 3002405 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyCystine-knot cytokines 8038779 3000846 SCOP2B (2022-06-29)
E [auth F]SCOP2B Superfamilypro-TGF beta-like 8089966 3002405 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyIntegrin domains 8055305 3002062 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyIntegrin alpha N-terminal domain 8041564 3000314 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth E],
E [auth F]
PF00688TGF-beta propeptide (TGFb_propeptide)TGF-beta propeptide- Family
D [auth E],
E [auth F]
PF00019Transforming growth factor beta like domain (TGF_beta)Transforming growth factor beta like domainDomain
C [auth B]PF00362Integrin beta chain VWA domain (Integrin_beta)Integrin beta chain VWA domainIntegrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. Domain
B [auth A]PF01839FG-GAP repeat (FG-GAP)FG-GAP repeat- Repeat
B [auth A]PF08441Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1)Integrin alpha Ig-like domain 1This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain
A [auth I]PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
A [auth I]PF01462Leucine rich repeat N-terminal domain (LRRNT)Leucine rich repeat N-terminal domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth E],
E [auth F]
Transforming growth factor beta-1 proprotein
C [auth B]Integrin beta-8
B [auth A]Integrin alpha-V heavy chain
A [auth I]Transforming growth factor beta activator LRRC32

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth E],
E [auth F]
IPR003939Transforming growth factor beta-1 proproteinFamily
D [auth E],
E [auth F]
IPR029034Cystine-knot cytokineHomologous Superfamily
D [auth E],
E [auth F]
IPR001839Transforming growth factor-beta, C-terminalDomain
D [auth E],
E [auth F]
IPR016319Transforming growth factor-betaFamily
D [auth E],
E [auth F]
IPR015615Transforming growth factor-beta-relatedFamily
D [auth E],
E [auth F]
IPR017948Transforming growth factor beta, conserved siteConserved Site
D [auth E],
E [auth F]
IPR001111TGF-beta, propeptideDomain
C [auth B]IPR033760Integrin beta N-terminalDomain
C [auth B]IPR015812Integrin beta subunitFamily
C [auth B]IPR002369Integrin beta subunit, VWA domainDomain
C [auth B]IPR016201PSI domainDomain
C [auth B]IPR000742EGF-like domainDomain
C [auth B]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
C [auth B]IPR032695Integrin domain superfamilyHomologous Superfamily
B [auth A]IPR013517FG-GAP repeatRepeat
B [auth A]IPR048286Integrin alpha, third immunoglobulin-like domainDomain
B [auth A]IPR013649Integrin alpha, first immunoglubulin-like domainDomain
B [auth A]IPR048285Integrin alpha, second immunoglobulin-like domainDomain
B [auth A]IPR032695Integrin domain superfamilyHomologous Superfamily
B [auth A]IPR013519Integrin alpha beta-propellorRepeat
B [auth A]IPR000413Integrin alpha chainFamily
B [auth A]IPR028994Integrin alpha, N-terminalHomologous Superfamily
B [auth A]IPR018184Integrin alpha chain, C-terminal cytoplasmic region, conserved siteConserved Site
A [auth I]IPR000372Leucine-rich repeat N-terminal domainDomain
A [auth I]IPR001611Leucine-rich repeatRepeat
A [auth I]IPR003591Leucine-rich repeat, typical subtypeRepeat
A [auth I]IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D [auth E],
E [auth F]
PharosP01137
C [auth B]PharosP26012
B [auth A]PharosP06756
A [auth I]PharosQ14392