8VS9 | pdb_00008vs9

Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth L05]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
H [auth L04]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
G [auth L03]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
F [auth L02]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
F [auth L02]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
FB [auth SMPB]SCOP2B SuperfamilySmall protein B (SmpB) 8098370 3000956 SCOP2B (2022-06-29)
EB [auth S21]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
CB [auth S19]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
AB [auth S17]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
ZA [auth S16]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
YA [auth S15]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
XA [auth S14]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
WA [auth S13]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
VA [auth S12]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
UA [auth S11]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
TA [auth S10]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
SA [auth S09]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
RA [auth S08]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
QA [auth S07]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
PA [auth S06]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
NA [auth S04]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
LA [auth S02]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
KA [auth L36]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
JA [auth L35]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
HA [auth L33]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
GA [auth L32]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
EA [auth L30]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
DA [auth L29]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
CA [auth L28]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
BA [auth L27]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
AA [auth L25]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
Z [auth L24]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
Y [auth L23]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
X [auth L22]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
W [auth L21]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
V [auth L20]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
U [auth L19]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
T [auth L18]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
S [auth L17]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
R [auth L16]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
Q [auth L15]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
P [auth L14]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
O [auth L13]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
N [auth L11]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
N [auth L11]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
M [auth L10]SCOP2B SuperfamilyRibosomal protein L10-like 8079773 3000665 SCOP2B (2022-06-29)
K [auth L09]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
K [auth L09]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
J [auth L06]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
J [auth L06]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth L05]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
I [auth L05]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
H [auth L04]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth L03]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
F [auth L02]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
F [auth L02]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
FB [auth SMPB]PF01668SmpB protein (SmpB)SmpB protein- Family
CB [auth S19]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
BB [auth S18]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
AB [auth S17]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
ZA [auth S16]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
YA [auth S15]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
XA [auth S14]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
WA [auth S13]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VA [auth S12]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
UA [auth S11]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
TA [auth S10]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
SA [auth S09]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
RA [auth S08]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
PA [auth S06]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
OA [auth S05]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
OA [auth S05]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
NA [auth S04]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
NA [auth S04]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth S03]PF07650KH domain (KH_2)KH domainDomain
MA [auth S03]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
LA [auth S02]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
KA [auth L36]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
JA [auth L35]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
IA [auth L34]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
HA [auth L33]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
GA [auth L32]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
FA [auth L31]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
EA [auth L30]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
DA [auth L29]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
CA [auth L28]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AA [auth L25]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
Z [auth L24]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
Z [auth L24]PF00467KOW motif (KOW)KOW motif- Family
Y [auth L23]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
X [auth L22]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
W [auth L21]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
V [auth L20]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
U [auth L19]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
S [auth L17]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
R [auth L16]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
Q [auth L15]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
P [auth L14]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
O [auth L13]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
N [auth L11]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
N [auth L11]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
M [auth L10]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
L [auth L1]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
K [auth L09]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
K [auth L09]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
J [auth L06]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth L05]50S ribosomal protein L5
H [auth L04]50S ribosomal protein L4
G [auth L03]50S ribosomal protein L3
F [auth L02]50S ribosomal protein L2
GB [auth TMRN]TMRN---
FB [auth SMPB]SsrA-binding protein
EB [auth S21]30S ribosomal protein S21
DB [auth S20]30S ribosomal protein S20
CB [auth S19]30S ribosomal protein S19
BB [auth S18]30S ribosomal protein S18
AB [auth S17]Small ribosomal subunit protein uS17
ZA [auth S16]30S ribosomal protein S16
YA [auth S15]Small ribosomal subunit protein uS15
XA [auth S14]Small ribosomal subunit protein uS14
E [auth ETRN]E-tRNA---
WA [auth S13]30S ribosomal protein S13
VA [auth S12]30S ribosomal protein S12
UA [auth S11]30S ribosomal protein S11
TA [auth S10]30S ribosomal protein S10
SA [auth S09]Small ribosomal subunit protein uS9
RA [auth S08]30S ribosomal protein S8
QA [auth S07]30S ribosomal protein S7
PA [auth S06]30S ribosomal protein S6
OA [auth S05]30S ribosomal protein S5
NA [auth S04]30S ribosomal protein S4
D [auth ATRN]A-tRNA---
MA [auth S03]30S ribosomal protein S3
LA [auth S02]30S ribosomal protein S2
KA [auth L36]50S ribosomal protein L36
JA [auth L35]50S ribosomal protein L35
IA [auth L34]50S ribosomal protein L34
HA [auth L33]Large ribosomal subunit protein bL33
GA [auth L32]50S ribosomal protein L32
FA [auth L31]Large ribosomal subunit protein bL31
EA [auth L30]Large ribosomal subunit protein uL30
DA [auth L29]50S ribosomal protein L29
C [auth 5S]5S ribosomal RNA---
CA [auth L28]50S ribosomal protein L28
BA [auth L27]50S ribosomal protein L27
AA [auth L25]50S ribosomal protein L25
Z [auth L24]50S ribosomal protein L24
Y [auth L23]50S ribosomal protein L23
X [auth L22]50S ribosomal protein L22
W [auth L21]Ribosomal protein L21
V [auth L20]50S ribosomal protein L20
U [auth L19]50S ribosomal protein L19
T [auth L18]50S ribosomal protein L18
B [auth 23S]23S ribosomal RNA---
S [auth L17]Large ribosomal subunit protein bL17
R [auth L16]50S ribosomal protein L16
Q [auth L15]50S ribosomal protein L15
P [auth L14]50S ribosomal protein L14
O [auth L13]50S ribosomal protein L13
N [auth L11]50S ribosomal protein L11
M [auth L10]50S ribosomal protein L10
L [auth L1]50S ribosomal protein L1
K [auth L09]Large ribosomal subunit protein bL9
J [auth L06]50S ribosomal protein L6
A [auth 16S]16S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth L05]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
I [auth L05]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
I [auth L05]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
I [auth L05]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
I [auth L05]IPR002132Large ribosomal subunit protein uL5Family
I [auth L05]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
H [auth L04]IPR013005Large ribosomal subunit protein uL4-likeFamily
H [auth L04]IPR002136Large ribosomal subunit protein uL4Family
H [auth L04]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth L03]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth L03]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
G [auth L03]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth L03]IPR000597Large ribosomal subunit protein uL3Family
F [auth L02]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
F [auth L02]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
F [auth L02]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth L02]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth L02]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
F [auth L02]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth L02]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth L02]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
F [auth L02]IPR002171Large ribosomal subunit protein uL2Family
FB [auth SMPB]IPR020081SsrA-binding protein, conserved siteConserved Site
FB [auth SMPB]IPR023620Small protein BHomologous Superfamily
FB [auth SMPB]IPR000037SsrA-binding proteinFamily
EB [auth S21]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
EB [auth S21]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
EB [auth S21]IPR001911Small ribosomal subunit protein bS21Family
DB [auth S20]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
DB [auth S20]IPR002583Small ribosomal subunit protein bS20Family
CB [auth S19]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
CB [auth S19]IPR002222Small ribosomal subunit protein uS19Family
CB [auth S19]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
CB [auth S19]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
BB [auth S18]IPR001648Small ribosomal subunit protein bS18Family
BB [auth S18]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
BB [auth S18]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
AB [auth S17]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
AB [auth S17]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
AB [auth S17]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AB [auth S17]IPR000266Small ribosomal subunit protein uS17Family
ZA [auth S16]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
ZA [auth S16]IPR000307Small ribosomal subunit protein bS16Family
ZA [auth S16]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
YA [auth S15]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
YA [auth S15]IPR000589Small ribosomal subunit protein uS15Family
YA [auth S15]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
XA [auth S14]IPR001209Small ribosomal subunit protein uS14Family
XA [auth S14]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
XA [auth S14]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
WA [auth S13]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
WA [auth S13]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
WA [auth S13]IPR001892Small ribosomal subunit protein uS13Family
WA [auth S13]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
WA [auth S13]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
VA [auth S12]IPR005679Ribosomal protein uS12, bacteriaFamily
VA [auth S12]IPR006032Small ribosomal subunit protein uS12Family
VA [auth S12]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth S11]IPR001971Small ribosomal subunit protein uS11Family
UA [auth S11]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
UA [auth S11]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
UA [auth S11]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
TA [auth S10]IPR027486Small ribosomal subunit protein uS10 domainDomain
TA [auth S10]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
TA [auth S10]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TA [auth S10]IPR001848Small ribosomal subunit protein uS10Family
SA [auth S09]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
SA [auth S09]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
SA [auth S09]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
SA [auth S09]IPR000754Small ribosomal subunit protein uS9Family
SA [auth S09]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth S08]IPR000630Small ribosomal subunit protein uS8Family
RA [auth S08]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RA [auth S08]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QA [auth S07]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
QA [auth S07]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
QA [auth S07]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
QA [auth S07]IPR000235Small ribosomal subunit protein uS7Family
QA [auth S07]IPR023798Small ribosomal subunit protein uS7 domainDomain
PA [auth S06]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
PA [auth S06]IPR000529Small ribosomal subunit protein bS6Family
PA [auth S06]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
PA [auth S06]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
PA [auth S06]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
OA [auth S05]IPR000851Small ribosomal subunit protein uS5Family
OA [auth S05]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
OA [auth S05]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
OA [auth S05]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
OA [auth S05]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
OA [auth S05]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
OA [auth S05]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
NA [auth S04]IPR002942RNA-binding S4 domainDomain
NA [auth S04]IPR022801Small ribosomal subunit protein uS4Family
NA [auth S04]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
NA [auth S04]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
NA [auth S04]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
NA [auth S04]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
MA [auth S03]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
MA [auth S03]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
MA [auth S03]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
MA [auth S03]IPR004087K Homology domainDomain
MA [auth S03]IPR004044K Homology domain, type 2Domain
MA [auth S03]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
MA [auth S03]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
MA [auth S03]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
LA [auth S02]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
LA [auth S02]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
LA [auth S02]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
LA [auth S02]IPR001865Small ribosomal subunit protein uS2Family
KA [auth L36]IPR000473Large ribosomal subunit protein bL36Family
KA [auth L36]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
JA [auth L35]IPR021137Large ribosomal subunit protein bL35-likeFamily
JA [auth L35]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
JA [auth L35]IPR001706Large ribosomal subunit protein bL35Family
JA [auth L35]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IA [auth L34]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
IA [auth L34]IPR000271Large ribosomal subunit protein bL34Family
HA [auth L33]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth L33]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
HA [auth L33]IPR001705Large ribosomal subunit protein bL33Family
HA [auth L33]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
GA [auth L32]IPR002677Large ribosomal subunit protein bL32Family
GA [auth L32]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth L32]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
FA [auth L31]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
FA [auth L31]IPR027491Large ribosomal subunit protein bL31 type AFamily
FA [auth L31]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
FA [auth L31]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
EA [auth L30]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
EA [auth L30]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
EA [auth L30]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
EA [auth L30]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
DA [auth L29]IPR050063Universal ribosomal protein uL29Family
DA [auth L29]IPR001854Large ribosomal subunit protein uL29Family
DA [auth L29]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
DA [auth L29]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
CA [auth L28]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
CA [auth L28]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
CA [auth L28]IPR026569Large ribosomal subunit protein bL28Family
CA [auth L28]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
BA [auth L27]IPR001684Large ribosomal subunit protein bL27Family
BA [auth L27]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
AA [auth L25]IPR020055Ribosomal protein bL25, short-formFamily
AA [auth L25]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
AA [auth L25]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
AA [auth L25]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
AA [auth L25]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
Z [auth L24]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Z [auth L24]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth L24]IPR003256Large ribosomal subunit protein uL24Family
Z [auth L24]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
Z [auth L24]IPR005824KOWDomain
Z [auth L24]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Y [auth L23]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Y [auth L23]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Y [auth L23]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Y [auth L23]IPR013025Large ribosomal subunit protein uL23-likeFamily
X [auth L22]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
X [auth L22]IPR001063Large ribosomal subunit protein uL22Family
X [auth L22]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
X [auth L22]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
X [auth L22]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
W [auth L21]IPR028909Large ribosomal subunit protein bL21-likeFamily
W [auth L21]IPR001787Large ribosomal subunit protein bL21Family
W [auth L21]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
W [auth L21]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
V [auth L20]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
V [auth L20]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
V [auth L20]IPR005813Large ribosomal subunit protein bL20Family
U [auth L19]IPR001857Large ribosomal subunit protein bL19Family
U [auth L19]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
U [auth L19]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
U [auth L19]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth L18]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
T [auth L18]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
S [auth L17]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
S [auth L17]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
S [auth L17]IPR000456Large ribosomal subunit protein bL17Family
R [auth L16]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
R [auth L16]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
R [auth L16]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
R [auth L16]IPR016180Large ribosomal subunit protein uL16 domainDomain
R [auth L16]IPR047873Large ribosomal subunit protein uL16Family
Q [auth L15]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Q [auth L15]IPR030878Large ribosomal subunit protein uL15Family
Q [auth L15]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Q [auth L15]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth L15]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
P [auth L14]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
P [auth L14]IPR000218Large ribosomal subunit protein uL14Family
P [auth L14]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
P [auth L14]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
O [auth L13]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
O [auth L13]IPR005822Large ribosomal subunit protein uL13Family
O [auth L13]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
O [auth L13]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
N [auth L11]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
N [auth L11]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
N [auth L11]IPR000911Ribosomal protein uL11Family
N [auth L11]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
N [auth L11]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
N [auth L11]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
N [auth L11]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
M [auth L10]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
M [auth L10]IPR001790Large ribosomal subunit protein uL10Family
M [auth L10]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
M [auth L10]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
M [auth L10]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
L [auth L1]IPR005878Large ribosomal subunit protein uL1, bacteriaFamily
L [auth L1]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
L [auth L1]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
L [auth L1]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
L [auth L1]IPR002143Large ribosomal subunit protein uL1Family
L [auth L1]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
K [auth L09]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
K [auth L09]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
K [auth L09]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
K [auth L09]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
K [auth L09]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
K [auth L09]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
K [auth L09]IPR000244Large ribosomal subunit protein bL9Family
J [auth L06]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
J [auth L06]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
J [auth L06]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth L06]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
J [auth L06]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site