I [auth L05] PF00281 Ribosomal protein L5 (Ribosomal_L5) Ribosomal protein L5 Domain I [auth L05] PF00673 ribosomal L5P family C-terminus (Ribosomal_L5_C) ribosomal L5P family C-terminus This region is found associated with Pfam:PF00281. Domain H [auth L04] PF00573 Ribosomal protein L4/L1 family (Ribosomal_L4) Ribosomal protein L4/L1 family - Family G [auth L03] PF00297 Ribosomal protein L3 (Ribosomal_L3) Ribosomal protein L3 - Family F [auth L02] PF03947 Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) Ribosomal Proteins L2, C-terminal domain Domain F [auth L02] PF00181 Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) Ribosomal Proteins L2, RNA binding N-terminal domain Domain FB [auth SMPB] PF01668 SmpB protein (SmpB) SmpB protein - Family CB [auth S19] PF00203 Ribosomal protein S19 (Ribosomal_S19) Ribosomal protein S19 Domain BB [auth S18] PF01084 Ribosomal protein S18 (Ribosomal_S18) Ribosomal protein S18 - Family AB [auth S17] PF00366 Ribosomal protein S17 (Ribosomal_S17) Ribosomal protein S17 Domain ZA [auth S16] PF00886 Ribosomal protein S16 (Ribosomal_S16) Ribosomal protein S16 - Family YA [auth S15] PF00312 Ribosomal protein S15 (Ribosomal_S15) Ribosomal protein S15 Domain XA [auth S14] PF00253 Ribosomal protein S14p/S29e (Ribosomal_S14) Ribosomal protein S14p/S29e - Family WA [auth S13] PF00416 Ribosomal protein S13/S18 (Ribosomal_S13) Ribosomal protein S13/S18 - Family VA [auth S12] PF00164 Ribosomal protein S12/S23 (Ribosom_S12_S23) Ribosomal protein S12/S23 This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain UA [auth S11] PF00411 Ribosomal protein S11 (Ribosomal_S11) Ribosomal protein S11 - Family TA [auth S10] PF00338 Ribosomal protein S10p/S20e (Ribosomal_S10) Ribosomal protein S10p/S20e This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain SA [auth S09] PF00380 Ribosomal protein S9/S16 (Ribosomal_S9) Ribosomal protein S9/S16 - Family RA [auth S08] PF00410 Ribosomal protein S8 (Ribosomal_S8) Ribosomal protein S8 Domain PA [auth S06] PF01250 Ribosomal protein S6 (Ribosomal_S6) Ribosomal protein S6 Domain OA [auth S05] PF03719 Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) Ribosomal protein S5, C-terminal domain Domain OA [auth S05] PF00333 Ribosomal protein S5, N-terminal domain (Ribosomal_S5) Ribosomal protein S5, N-terminal domain Domain NA [auth S04] PF00163 Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) Ribosomal protein S4/S9 N-terminal domain - Family NA [auth S04] PF01479 S4 domain (S4) S4 domain The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA. Less Domain MA [auth S03] PF07650 KH domain (KH_2) KH domain Domain MA [auth S03] PF00189 Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) Ribosomal protein S3, C-terminal domain This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain LA [auth S02] PF00318 Ribosomal protein S2 (Ribosomal_S2) Ribosomal protein S2 - Family KA [auth L36] PF00444 Ribosomal protein L36 (Ribosomal_L36) Ribosomal protein L36 Domain JA [auth L35] PF01632 Ribosomal protein L35 (Ribosomal_L35p) Ribosomal protein L35 - Family IA [auth L34] PF00468 Ribosomal protein L34 (Ribosomal_L34) Ribosomal protein L34 - Family HA [auth L33] PF00471 Ribosomal protein L33 (Ribosomal_L33) Ribosomal protein L33 - Family GA [auth L32] PF01783 Ribosomal L32p protein family (Ribosomal_L32p) Ribosomal L32p protein family - Family FA [auth L31] PF01197 Ribosomal protein L31 (Ribosomal_L31) Ribosomal protein L31 - Family EA [auth L30] PF00327 Ribosomal protein L30p/L7e (Ribosomal_L30) Ribosomal protein L30p/L7e This family includes prokaryotic L30 and eukaryotic L7. Domain DA [auth L29] PF00831 Ribosomal L29 protein (Ribosomal_L29) Ribosomal L29 protein - Family CA [auth L28] PF00830 Ribosomal L28 family (Ribosomal_L28) Ribosomal L28 family - Family AA [auth L25] PF01386 Ribosomal L25p family (Ribosomal_L25p) Ribosomal L25p family Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain Z [auth L24] PF17136 Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) Large ribosomal subunit protein uL24, C-terminal domain This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3]. Less Domain Z [auth L24] PF00467 KOW motif (KOW) KOW motif - Family Y [auth L23] PF00276 Ribosomal protein L23 (Ribosomal_L23) Ribosomal protein L23 - Family X [auth L22] PF00237 Ribosomal protein L22p/L17e (Ribosomal_L22) Ribosomal protein L22p/L17e This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain W [auth L21] PF00829 Ribosomal prokaryotic L21 protein (Ribosomal_L21p) Ribosomal prokaryotic L21 protein - Family V [auth L20] PF00453 Ribosomal protein L20 (Ribosomal_L20) Ribosomal protein L20 - Family U [auth L19] PF01245 Ribosomal protein L19 (Ribosomal_L19) Ribosomal protein L19 - Family S [auth L17] PF01196 Ribosomal protein L17 (Ribosomal_L17) Ribosomal protein L17 - Family R [auth L16] PF00252 Ribosomal protein L16p/L10e (Ribosomal_L16) Ribosomal protein L16p/L10e Domain Q [auth L15] PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain P [auth L14] PF00238 Ribosomal protein L14p/L23e (Ribosomal_L14) Ribosomal protein L14p/L23e Domain O [auth L13] PF00572 Ribosomal protein L13 (Ribosomal_L13) Ribosomal protein L13 - Family N [auth L11] PF03946 Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) Ribosomal protein L11, N-terminal domain The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain N [auth L11] PF00298 Ribosomal protein L11, RNA binding domain (Ribosomal_L11) Ribosomal protein L11, RNA binding domain Domain M [auth L10] PF00466 Ribosomal protein L10 (Ribosomal_L10) Ribosomal protein L10 - Family L [auth L1] PF00687 Ribosomal protein L1p/L10e family (Ribosomal_L1) Ribosomal protein L1p/L10e family This family includes prokaryotic L1 and eukaryotic L10. Domain K [auth L09] PF01281 Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) Ribosomal protein L9, N-terminal domain Domain K [auth L09] PF03948 Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C) Ribosomal protein L9, C-terminal domain Domain J [auth L06] PF00347 Ribosomal protein L6 (Ribosomal_L6) Ribosomal protein L6 Domain