Crystal Structure of the C-terminal domain of the VZV gE ectodomain in complex with the Fab of human antibody 5A2
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L [auth I] | V-set | e8v5pI1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| I [auth X] | V-set | e8v5pX1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| F [auth Y] | V-set | e8v5pY1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| C [auth L] | HATPase_c | e8v5pL01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: HATPase_c | ECOD (v295) |
| K [auth F] | V-set | e8v5pF1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| H [auth J] | V-set | e8v5pJ1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| E | V-set | e8v5pE1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| B [auth H] | HATPase_c | e8v5pH01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: HATPase_c | ECOD (v295) |
| J [auth C] | V-set | e8v5pC1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| G | V-set | e8v5pG1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| D | V-set | e8v5pD1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: V-set | ECOD (v295) |
| A | HATPase_c | e8v5pA01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: HATPase_c | ECOD (v295) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| C [auth L], F [auth Y], I [auth X], L [auth I] | Light Chain | IGKV1 | Kappa | envelope glycoprotein e | SAbDab (2026-06-26) |
| B [auth H], E, H [auth J], K [auth F] | Heavy Chain | IGHV4 | - | envelope glycoprotein e | SAbDab (2026-06-26) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, D, G, J [auth C] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
| A, D, G, J [auth C] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
| A, D, G, J [auth C] | IPR046463 | Envelope glycoprotein E, N-terminal | Domain |
| A, D, G, J [auth C] | IPR003404 | Envelope glycoprotein E, Fc-binding domain | Domain |














