8TID | pdb_00008tid

Combined linker domain of N-DRC and associated proteins Tetrahymena

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
PF24656CEP76 peptidase-like domain (CEPT76_peptidase)CEP76 peptidase-like domainThis entry represents a domain found in the middle of centrosomal protein of 76 kDa, a protein involved in regulation of centriole duplication to limit centriole duplication to once per cell cycle by preventing centriole reduplication [1]. This domai ...This entry represents a domain found in the middle of centrosomal protein of 76 kDa, a protein involved in regulation of centriole duplication to limit centriole duplication to once per cell cycle by preventing centriole reduplication [1]. This domain is also found at the C-terminal of C2D2A/B, whose function is unknown, and in dynein regulatory complex subunit 7 (DRC7). In DRC7, this model covers the C-terminal part of the domain as it has an insertion not present in the other members of the entry. This domain is may adopt a fold related to peptidases.
Domain
PF24667Dynein regulatory complex subunit 7 MORN domain (MORN_DRC7)Dynein regulatory complex subunit 7 MORN domain- Repeat
PF13516Leucine Rich repeat (LRR_6)Leucine Rich repeat- Repeat
PF05018CFA20 domain (CFA20_dom)CFA20 domainThis domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility [1,2]. In Chlamydomonas reinhardtii, it stabilises ...This domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility [1,2]. In Chlamydomonas reinhardtii, it stabilises outer doublet microtubules (DMTs) of the axoneme and may work as a scaffold for intratubular proteins, such as tektin and PACRG, to produce the beak structures in DMT1 [2,3]. Other proteins contain a domain with homology to CFA20. WDR90/POC16 contains such a domain in its N terminus, followed by a large C-terminal domain with multiple WD40 repeats [2]. This domain is also present in the N terminus of uncharacterised protein C3orf67.
Domain
PF13516Leucine Rich repeat (LRR_6)Leucine Rich repeat- Repeat
PF13851Growth-arrest specific micro-tubule binding (GAS)Growth-arrest specific micro-tubule binding- Coiled-coil
PF13851Growth-arrest specific micro-tubule binding (GAS)Growth-arrest specific micro-tubule binding- Coiled-coil
PF12799Leucine Rich repeats (2 copies) (LRR_4)Leucine Rich repeats (2 copies)- Repeat
X [auth Z]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF14772Sperm tail (NYD-SP28)Sperm tail- Family
PF13870CCDC113/CCDC96, coiled-coil (CCDC113_CCDC96_CC)CCDC113/CCDC96, coiled-coil- Coiled-coil
Q, R
PF13405EF-hand domain (EF-hand_6)EF-hand domainDomain
PF13870CCDC113/CCDC96, coiled-coil (CCDC113_CCDC96_CC)CCDC113/CCDC96, coiled-coil- Coiled-coil
PF23449CFAP184 CBM-like domain (CBM-like_CFAP184)CFAP184 CBM-like domainThis entry represents a domain found in Cilia- and flagella-associated protein 184 (also known as CCDC96, SwissProt:I7M6D6) from Tetrahymena thermophila and similar sequences. CFAP184 forms a complex with CFAP263, and acts as a regulator of ciliary b ...This entry represents a domain found in Cilia- and flagella-associated protein 184 (also known as CCDC96, SwissProt:I7M6D6) from Tetrahymena thermophila and similar sequences. CFAP184 forms a complex with CFAP263, and acts as a regulator of ciliary beating that connects radial spoke 3 (RS3) to the inner dynein arm (IDA) and the nexin-dynein regulatory complex (N-DRC) [1]. This domain may have a CBM-like (carbohydrate-binding module) fold according to structure predictions and comparison.
Domain
PF23448CFAP184 CAP-like domain (CAP-like_CFAP184)CFAP184 CAP-like domainThis entry represents a domain found in Cilia- and flagella-associated protein 184 (also known as CCDC96, SwissProt:I7M6D6) from Tetrahymena thermophila and similar sequences. CFAP184 forms a complex with CFAP263, and acts as a regulator of ciliary b ...This entry represents a domain found in Cilia- and flagella-associated protein 184 (also known as CCDC96, SwissProt:I7M6D6) from Tetrahymena thermophila and similar sequences. CFAP184 forms a complex with CFAP263, and acts as a regulator of ciliary beating that connects radial spoke 3 (RS3) to the inner dynein arm (IDA) and the nexin-dynein regulatory complex (N-DRC) [1]. This domain may have a CAP-like (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) fold according to structure predictions and comparison.
Domain
BA [auth o],
O		PF08647BRE1 E3 ubiquitin ligase (BRE1)BRE1 E3 ubiquitin ligase- Coiled-coil
PF14772Sperm tail (NYD-SP28)Sperm tail- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
AAA family ATPase CDC48 subfamily protein - -
Y [auth g]CFAP20- - -
I,
Z [auth i]		EF-hand calcium-binding domain protein - -
Coiled-coil lobo-like protein, putative-
Kinase domain protein
Flagellar associated protein- - -
Growth-arrest-specific microtubule-binding protein
Growth-arrest-specific microtubule-binding protein
LRRC48 protein- -
DA [auth w]WD40 domain protein- -
X [auth Z]EF hand protein -
WD40 domain protein- -
U, V
L-shape (Unknown-protein)---
Coiled-coil protein, putative-
Flagellar associated protein-
CA [auth s],
S		Coiled-coil domain-containing protein 153- - -
Q, R
Calmodulin 7-2 -
DUF4201 domain-containing protein-
BA [auth o],
O		Coiled-coil protein, putative-
AA [auth n],
N		Flagella associated protein-
Cilia- and flagella-associated protein 91- -
Dynein regulatory complex protein 10- - -
Dynein regulatory complex protein 9-
Dynein regulatory complex protein 1/2 N-terminal domain-containing protein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR003959ATPase, AAA-type, coreDomain
IPR052267Nexin-Dynein Regulatory Complex ComponentFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
Y [auth g]IPR040441Cilia- and flagella-associated protein 20/CFAP20DCFamily
Y [auth g]IPR007714CFA20 domainDomain
I,
Z [auth i]		IPR002048EF-hand domainDomain
I,
Z [auth i]		IPR011992EF-hand domain pairHomologous Superfamily
IPR056291Dynein regulatory complex subunit 7, MORN domainDomain
IPR056290CEP76/DRC7, peptidase-like domainDomain
IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
IPR033551Dynein regulatory complex subunit 7Family
IPR056292Dynein regulatory complex subunit 7, C-terminalDomain
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR027038Ran GTPase-activating proteinFamily
IPR052201Leucine-rich repeat-containing regulator of pluripotencyFamily
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR039308Growth arrest-specific protein 8Family
IPR025593Growth arrest-specific protein 8 domainDomain
IPR039308Growth arrest-specific protein 8Family
IPR025593Growth arrest-specific protein 8 domainDomain
IPR025875Leucine rich repeat 4Repeat
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR050576Ciliary and flagellar integrity-associated proteinFamily
DA [auth w]IPR001680WD40 repeatRepeat
DA [auth w]IPR052993Cilia- and flagella-associated protein 57Family
DA [auth w]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
DA [auth w]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
X [auth Z]IPR001680WD40 repeatRepeat
X [auth Z]IPR018247EF-Hand 1, calcium-binding siteBinding Site
X [auth Z]IPR019775WD40 repeat, conserved siteConserved Site
X [auth Z]IPR051242WD repeat and EF-hand domain-containing proteinFamily
X [auth Z]IPR002048EF-hand domainDomain
X [auth Z]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
X [auth Z]IPR011992EF-hand domain pairHomologous Superfamily
X [auth Z]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
IPR052993Cilia- and flagella-associated protein 57Family
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR039505Dynein regulatory complex protein 1/2, N-terminalDomain
IPR039750Dynein regulatory complex proteinFamily
IPR025254CCDC113/CCDC96, coiled-coilDomain
IPR051885Coiled-coil domain-containing protein involved in ciliogenesisFamily
CA [auth s],
S		IPR033585Dynein regulatory complex protein 12-likeFamily
Q, R
IPR050230Calmodulin/Myosin light chain/Troponin C-likeFamily
Q, R
IPR018247EF-Hand 1, calcium-binding siteBinding Site
Q, R
IPR002048EF-hand domainDomain
Q, R
IPR011992EF-hand domain pairHomologous Superfamily
IPR056294CFAP184, CAP-like domainDomain
IPR025254CCDC113/CCDC96, coiled-coilDomain
IPR035940CAP superfamilyHomologous Superfamily
IPR051885Coiled-coil domain-containing protein involved in ciliogenesisFamily
IPR056295CFAP184, CBM-like domainDomain
BA [auth o],
O		IPR037386Coiled-coil domain-containing protein 40Family
AA [auth n],
N		IPR033290Coiled-coil domain-containing protein 39Family
IPR026720Cilia- and flagella-associated protein 91Family
IPR032840CFAP91 domainDomain
IPR042815Dynein regulatory complex protein 10Family
IPR042618Dynein regulatory complex protein 9Family
IPR039505Dynein regulatory complex protein 1/2, N-terminalDomain
IPR039750Dynein regulatory complex proteinFamily