Annotations: 8T9L

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], C [auth D]	PF24097	Nucleoporin POM152, N-terminal transmembrane domain (TMD_POM152)	Nucleoporin POM152, N-terminal transmembrane domain	This domain is found at the N-terminal end of Nucleoporin POM152 from Saccharomyces cerevisiae and similar fungal proteins. POM152, a component of the nuclear pore complex (NPC), is important for the de novo assembly of NPCs. This protein consists of ...	This domain is found at the N-terminal end of Nucleoporin POM152 from Saccharomyces cerevisiae and similar fungal proteins. POM152, a component of the nuclear pore complex (NPC), is important for the de novo assembly of NPCs. This protein consists of an N-terminal transmembrane domain (TMD, this entry) and an extended C-terminal domain (CTD) with tandem repeats of Ig-like domains [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth A], D [auth C]	Nucleoporin POM34	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport establishment of localization spindle pole body duplication microtubule organizing center organization microtubule cytoskeleton organization cellular component biogenesis cellular component assembly spindle pole body organization microtubule-based process cell cycle cytoskeleton organization cell cycle process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization RNA localization nucleobase-containing compound transport	membrane-bounded organelle nuclear outer membrane intracellular anatomical structure nuclear membrane membrane nucleus organelle outer membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle organelle membrane-bounded organelle nuclear outer membrane intracellular anatomical structure nuclear membrane membrane nucleus organelle outer membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network nuclear envelope outer membrane organelle membrane membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen protein-containing complex nuclear protein-containing complex nuclear pore transmembrane ring nuclear pore
A [auth B], C [auth D]	Nucleoporin POM152	protein-membrane adaptor activity protein-macromolecule adaptor activity molecular adaptor activity structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport spindle pole body duplication microtubule organizing center organization microtubule cytoskeleton organization cellular component biogenesis cellular component assembly spindle pole body organization microtubule-based process cell cycle cytoskeleton organization cell cycle process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle nucleus membrane-enclosed lumen endomembrane system intracellular organelle lumen organelle envelope lumen organelle envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle nucleus membrane-enclosed lumen endomembrane system intracellular organelle lumen organelle envelope lumen organelle envelope organelle lumen nuclear envelope lumen nuclear envelope protein-containing complex nuclear protein-containing complex nuclear pore transmembrane ring nuclear pore nuclear membrane membrane organelle membrane cell periphery nuclear periphery nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A], D [auth C]	IPR012578	Nuclear pore complex component	Family
A [auth B], C [auth D]	IPR056544	Nucleoporin POM152, immunoglobulin-like domain	Domain
A [auth B], C [auth D]	IPR056540	Nucleoporin POM152, N-terminal transmembrane domain	Domain
A [auth B], C [auth D]	IPR056542	Nucleoporin POM152, first Ig-like domain	Domain
A [auth B], C [auth D]	IPR056543	Nucleoporin POM152, ninth Ig-like domain	Domain
A [auth B], C [auth D]	IPR037701	Nucleoporin Pom152	Family
A [auth B], C [auth D]	IPR056541	Nucleoporin POM152, Ig-like domain	Domain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth B], B [auth A], C [auth D], D [auth C]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A [auth B], B [auth A], C [auth D], D [auth C]	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.