8SVA
Structure of the Rhodococcus sp. USK13 DarR-20 bp DNA complex
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PF00440 | e8svaA2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
| A | PF17932 | e8svaA1 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF17932 | ECOD (1.6) |
| B [auth F] | PF00440 | e8svaF2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
| B [auth F] | PF17932 | e8svaF1 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF17932 | ECOD (1.6) |
| C [auth G] | PF00440 | e8svaG1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
| C [auth G] | PF17932 | e8svaG2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF17932 | ECOD (1.6) |
| D [auth T] | PF00440 | e8svaT2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
| D [auth T] | PF17932 | e8svaT1 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF17932 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A, B [auth F], C [auth G], D [auth T] | TetR/AcrR family transcriptional regulator |
| - | - |
| E [auth B], F [auth D] | DNA (5'-D(*TP*AP*GP*AP*TP*AP*CP*TP*CP*CP*GP*GP*AP*GP*TP*AP*TP*CP*TP*A)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B [auth F], C [auth G], D [auth T] | IPR023772 | DNA-binding HTH domain, TetR-type, conserved site | Conserved Site |
| A, B [auth F], C [auth G], D [auth T] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
| A, B [auth F], C [auth G], D [auth T] | IPR001647 | DNA-binding HTH domain, TetR-type | Domain |
| A, B [auth F], C [auth G], D [auth T] | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | Homologous Superfamily |
| A, B [auth F], C [auth G], D [auth T] | IPR041490 | HTH-type transcriptional repressor KstR2, C-terminal | Domain |
