8S72 | pdb_00008s72

Crystal structure of neutralizing Fab Eq4.Dp46-3D from equine antivenom bound to a consensus short chain three finger alpha-neurotoxin.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth A]SCOP2B SuperfamilySnake toxin-like 8035902 3000545 SCOP2B (2022-06-29)
A [auth N]SCOP2B SuperfamilySnake toxin-like 8035902 3000545 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth N],
B [auth A]		PF21947Snake toxin cobra-type (Toxin_cobra-type)Snake toxin cobra-type- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth Y],
F [auth L]		Light chain of Fab domain from antivenom neutralizing antibody Eq4.Dp46-3D.---
C [auth X],
E [auth H]		Heavy chain of Fab domain from antivenom neutralizing antibody Eq4.Dp46-3D.---
A [auth N],
B [auth A]		Short neurotoxin 1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth N],
B [auth A]		IPR018354Snake toxin, conserved siteConserved Site
A [auth N],
B [auth A]		IPR045860Snake toxin-like superfamilyHomologous Superfamily
A [auth N],
B [auth A]		IPR054131Snake toxin cobra-typeFamily
A [auth N],
B [auth A]		IPR003571Snake three-finger toxinFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
D [auth Y],
F [auth L]		PCA Parent Component: GLN

RESID:  AA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420
C [auth X],
E [auth H]		PCA Parent Component: GLN

RESID:  AA0031 , AA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420 , 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420