8PUG

Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-NTD refinement

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF00607e8pugB1 A: alpha bundlesX: Retrovirus capsid proteinH: Retrovirus capsid protein N-terminal domain (From Topology)T: Retrovirus capsid protein N-terminal domainF: PF00607ECOD (1.6)
CPF00607e8pugC1 A: alpha bundlesX: Retrovirus capsid proteinH: Retrovirus capsid protein N-terminal domain (From Topology)T: Retrovirus capsid protein N-terminal domainF: PF00607ECOD (1.6)
APF00607e8pugA1 A: alpha bundlesX: Retrovirus capsid proteinH: Retrovirus capsid protein N-terminal domain (From Topology)T: Retrovirus capsid protein N-terminal domainF: PF00607ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Gag polyprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR003139Delta-retroviral matrix proteinDomain
A, B, C
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A, B, C
IPR001878Zinc finger, CCHC-typeDomain
A, B, C
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
A, B, C
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A, B, C
IPR010999Retroviral matrix proteinHomologous Superfamily
A, B, C
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily