8PE2 | pdb_00008pe2

Crystal structure of Gel4 in complex with Nanobody 3


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be8pe2B01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F:ECOD (v294.1)
Ae8pe2A01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F:ECOD (v294.1)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Heavy ChainIGHV1 -1,3-beta-glucanosyltransferaseSAbDab (2026-03-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07983X8 domain (X8)X8 domainThe X8 domain [2] domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen [1] as well as at the C-terminus of several families of glycosyl hydrolases [2]. T ...The X8 domain [2] domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen [1] as well as at the C-terminus of several families of glycosyl hydrolases [2]. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains [4,5].
Domain
PF03198Glucanosyltransferase (Glyco_hydro_72)GlucanosyltransferaseThis is a family of glycosylphosphatidylinositol-anchored beta(1-3)glucanosyltransferases. The active site residues in the Aspergillus fumigatus example Swiss:B0XT72 are the two glutamate residues at 160 and 261 [3]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Nanobody 3---
1,3-beta-glucanosyltransferase

InterPro: Protein Family Classification InterPro Database Homepage