8OZ6 | pdb_00008oz6

cryoEM structure of SPARTA complex ligand-free

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth H]Cas_Csm6_HEPNe8oz6H1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cas_Csm6_HEPNECOD (v295)
J [auth F]Cas_Csm6_HEPNe8oz6F1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cas_Csm6_HEPNECOD (v295)
F [auth D]Cas_Csm6_HEPNe8oz6D1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cas_Csm6_HEPNECOD (v295)
BeIF2_Ce8oz6B1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: eIF2_CECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth J],
H [auth L],
O,
P		DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')---
C [auth I],
G [auth K],
M,
N		RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')---
B,
F [auth D],
J [auth F],
L [auth H]		Piwi domain-containing protein - -
A,
E [auth C],
I [auth E],
K [auth G]		TIR domain-containing protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B,
F [auth D],
J [auth F],
L [auth H]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
B,
F [auth D],
J [auth F],
L [auth H]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
A,
E [auth C],
I [auth E],
K [auth G]		IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
A,
E [auth C],
I [auth E],
K [auth G]		IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily