The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unl ...
The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unlikely to be important for sealing the translocation pore in yeast but it plays a role in stabilising Sec61p during translocon formation. The domain runs from residues 52-74 [1].
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.
This entry represents the fifth winged helix-turn-helix (wHTH) domain found in the UFL1 protein. Winged helix-turn-helix domains are structural motifs commonly involved in protein-protein interactions and DNA binding. In the context of UFL1, this dom ...
This entry represents the fifth winged helix-turn-helix (wHTH) domain found in the UFL1 protein. Winged helix-turn-helix domains are structural motifs commonly involved in protein-protein interactions and DNA binding. In the context of UFL1, this domain is part of a complex protein involved in the UFM1 conjugation system and protein ufmylation.
This domain is found C-terminal in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key ...
This domain is found C-terminal in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key role in reticulophagy induced in response to endoplasmic reticulum stress [1]. UFL1 is a component of the UFM1 ribosome E3 ligase (UREL) complex which is involved in the release and recycling of stalled or terminated ribosomes from the ER membrane [2]. This domain is predicted to adopt globular structure consisting of an array of alpha-helices.
This domain is found in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key role in ret ...
This domain is found in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key role in reticulophagy induced in response to endoplasmic reticulum stress. This domain, which is predicted to show an all-alpha configuration, is often found associated to Pfam:PF09743.
This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.
This domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
