This is a family of short ubiquitin-like proteins, that is like neither type-1 or type-2. It is a ubiquitin-fold modifier 1 (Ufm1) that is synthesised in a precursor form of 85 amino-acid residues. In humans the enzyme for Ufm1 is Uba5 and the conjug ...
This is a family of short ubiquitin-like proteins, that is like neither type-1 or type-2. It is a ubiquitin-fold modifier 1 (Ufm1) that is synthesised in a precursor form of 85 amino-acid residues. In humans the enzyme for Ufm1 is Uba5 and the conjugating enzyme is Ufc1. Prior to activation by Uba5 the extra two amino acids at the C-terminal region of the human pro-Ufm1 protein are removed to expose Gly whose residue is necessary for conjugation to target molecule(s). The mature Ufm1 is conjugated to yet unidentified endogenous proteins,[1]. While Ubiquitin and many Ubls possess the conserved C-terminal di-glycine that is adenylated by each specific E1 or E1-like enzyme, respectively, in an ATP-dependent manner, Ufm1(1-83) possesses a single glycine at its C-terminus, which is followed by a Ser-Cys dipeptide in the precursor form of Ufm1. The C-terminally processed Ufm1(1-83) is specifically activated by Uba5, an E1-like enzyme, and then transferred to its cognate Ufc1, an E2-like enzyme [2].
This entry represents the fifth winged helix-turn-helix (wHTH) domain found in the UFL1 protein. Winged helix-turn-helix domains are structural motifs commonly involved in protein-protein interactions and DNA binding. In the context of UFL1, this dom ...
This entry represents the fifth winged helix-turn-helix (wHTH) domain found in the UFL1 protein. Winged helix-turn-helix domains are structural motifs commonly involved in protein-protein interactions and DNA binding. In the context of UFL1, this domain is part of a complex protein involved in the UFM1 conjugation system and protein ufmylation.
This domain is found C-terminal in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key ...
This domain is found C-terminal in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key role in reticulophagy induced in response to endoplasmic reticulum stress [1]. UFL1 is a component of the UFM1 ribosome E3 ligase (UREL) complex which is involved in the release and recycling of stalled or terminated ribosomes from the ER membrane [2]. This domain is predicted to adopt globular structure consisting of an array of alpha-helices.
This domain is found in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key role in ret ...
This domain is found in human E3 UFM1-protein ligase 1 (UFL1) and similar eukaryotic sequences. UFL1 mediates ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to lysine residues on target proteins, which plays a key role in reticulophagy induced in response to endoplasmic reticulum stress. This domain, which is predicted to show an all-alpha configuration, is often found associated to Pfam:PF09743.
This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.
This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.
This domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...
This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
