8JR9 | pdb_00008jr9

Small molecule agonist (PCO371) bound to human parathyroid hormone receptor type 1 (PTH1R)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091124 3000473 SCOP2B (2022-06-29)
E [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091124 3000473 SCOP2B (2022-06-29)
C [auth G]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth N]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D [auth N]Heavy ChainIGHV3 -guanine nucleotide-binding protein g(s) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 SAbDab (2025-11-28)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth R]Parathyroid hormone/parathyroid hormone-related peptide receptor
D [auth N]Nanobody 35---
C [auth G]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Guanine nucleotide-binding protein G(s) subunit alpha-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth R]IPR017983GPCR, family 2, secretin-like, conserved siteConserved Site
E [auth R]IPR050332G-protein coupled receptor 2Family
E [auth R]IPR036445GPCR family 2, extracellular hormone receptor domain superfamilyHomologous Superfamily
E [auth R]IPR002170GPCR, family 2, parathyroid hormone receptorFamily
E [auth R]IPR000832GPCR, family 2, secretin-likeFamily
E [auth R]IPR017981GPCR, family 2-like, 7TMDomain
E [auth R]IPR001879GPCR, family 2, extracellular hormone receptor domainDomain
C [auth G]IPR001770G-protein, gamma subunitFamily
C [auth G]IPR015898G-protein, gamma subunit-like domainDomain
C [auth G]IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily
IPR019775WD40 repeat, conserved siteConserved Site
IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
IPR001632G-protein beta subunit-like, WD40 repeatsDomain
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR016346G-protein subunit beta 1-5Family
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000367G-protein alpha subunit, group SFamily
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001408G-protein alpha subunit, group IFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth R]PharosQ03431
C [auth G]PharosP59768
PharosP62873
PharosP63096