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 8JKB | pdb_00008jkb

Cryo-EM structure of KCTD5 in complex with Gbeta gamma subunits

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
OSCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)
K [auth M]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)
D [auth L]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)
B [auth G]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth E]V-sete8jkbE1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
H [auth D]V-sete8jkbD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
G [auth C]V-sete8jkbC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
F [auth H]V-sete8jkbH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
E [auth A]e8jkbA01 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF:ECOD (v295.2)
OCullin_ABe8jkbO1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
M [auth N]Cullin_ABe8jkbN1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
K [auth M]Cullin_ABe8jkbM1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
D [auth L]Cullin_ABe8jkbL1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
B [auth G]HGTP_anticodone8jkbG1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: HGTP_anticodonECOD (v295.2)
N [auth K]Cullin_ABe8jkbK1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
L [auth J]Cullin_ABe8jkbJ1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
J [auth I]Cullin_ABe8jkbI1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
C [auth F]Cullin_ABe8jkbF1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
A [auth B]HGTP_anticodone8jkbB1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: HGTP_anticodonECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
N [auth K]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)
L [auth J]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)
J [auth I]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)
C [auth F]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)
A [auth B]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth A],
F [auth H],
G [auth C],
H [auth D],
I [auth E]		BTB/POZ domain-containing protein KCTD5
B [auth G],
D [auth L],
K [auth M],
M [auth N],
O		Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth A],
F [auth H],
G [auth C],
H [auth D],
I [auth E]		IPR063514KCTD2/KCTD5/KCTD17, C-terminal domainDomain
E [auth A],
F [auth H],
G [auth C],
H [auth D],
I [auth E]		IPR000210BTB/POZ domainDomain
E [auth A],
F [auth H],
G [auth C],
H [auth D],
I [auth E]		IPR003131Potassium channel tetramerisation-type BTB domainDomain
E [auth A],
F [auth H],
G [auth C],
H [auth D],
I [auth E]		IPR011333SKP1/BTB/POZ domain superfamilyHomologous Superfamily
B [auth G],
D [auth L],
K [auth M],
M [auth N],
O		IPR001770G-protein, gamma subunitFamily
B [auth G],
D [auth L],
K [auth M],
M [auth N],
O		IPR015898G-protein, gamma subunit-like domainDomain
B [auth G],
D [auth L],
K [auth M],
M [auth N],
O		IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR019775WD40 repeat, conserved siteConserved Site
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR001632G-protein beta subunit-like, WD40 repeatsDomain
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR016346G-protein subunit beta 1-5Family
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		IPR001680WD40 repeatRepeat

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth G],
D [auth L],
K [auth M],
M [auth N],
O		:  P59768
A [auth B],
C [auth F],
J [auth I],
L [auth J],
N [auth K]		:  P62873