8IPY | pdb_00008ipy

human nuclear pre-60S ribosomal particle - State D'


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth D]SCOP2B SuperfamilyRibosomal protein L4 8052832 3001146 SCOP2B (2022-06-29)
I [auth D]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052831 3002143 SCOP2B (2022-06-29)
H [auth B]SCOP2B SuperfamilyTranslational proteins 8078351 3000811 SCOP2B (2022-06-29)
FB [auth g]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095967 3000210 SCOP2B (2022-06-29)
EB [auth q]SCOP2B SuperfamilyBRCT domain-like 8092279 3000159 SCOP2B (2022-06-29)
CB [auth O]SCOP2B SuperfamilyRibosomal L38e protein-like 8053567 3002206 SCOP2B (2022-06-29)
BB [auth i]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053050 3000334 SCOP2B (2022-06-29)
AB [auth F]SCOP2B SuperfamilyRibosomal protein L34e-like 8053540 3002203 SCOP2B (2022-06-29)
ZA [auth K]SCOP2B SuperfamilyRibosomal protein L36e 8053120 3002161 SCOP2B (2022-06-29)
UA [auth d]SCOP2B Superfamily60S Ribosomal protein L22e 8053060 3002158 SCOP2B (2022-06-29)
RA [auth Y]SCOP2B SuperfamilyRibosomal protein L22 8076704 3001078 SCOP2B (2022-06-29)
NA [auth R]SCOP2B SuperfamilyTranslational machinery components 8052887 3000571 SCOP2B (2022-06-29)
MA [auth C]SCOP2B SuperfamilyRL5-like 8073892 3001709 SCOP2B (2022-06-29)
FA [auth p]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052923 3001378 SCOP2B (2022-06-29)
FA [auth p]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052922 3002152 SCOP2B (2022-06-29)
EA [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053100 3000334 SCOP2B (2022-06-29)
EA [auth o]SCOP2B SuperfamilyRibosomal protein L6e, N-terminal domain 8053099 3002160 SCOP2B (2022-06-29)
DA [auth n]SCOP2B SuperfamilyTranslational proteins 8087455 3000811 SCOP2B (2022-06-29)
C [auth 6]SCOP2B SuperfamilyPentein 8098764 3000640 SCOP2B (2022-06-29)
AA [auth h]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076756 3000334 SCOP2B (2022-06-29)
Z [auth e]SCOP2B Superfamily50S Ribosomal protein L14-like 8072050 3000433 SCOP2B (2022-06-29)
W [auth Z]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095977 3001045 SCOP2B (2022-06-29)
V [auth X]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101551 3001320 SCOP2B (2022-06-29)
T [auth U]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8098812 3000210 SCOP2B (2022-06-29)
R [auth Q]SCOP2B SuperfamilyRibosomal protein L13e-like 8053155 3002162 SCOP2B (2022-06-29)
Q [auth P]SCOP2B SuperfamilyRibosomal protein L39e 8095603 3001756 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyRibosomal protein L6 8033688 3000724 SCOP2B (2022-06-29)
J [auth E]SCOP2B SuperfamilyL30e-like 8077491 3001739 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth D]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
I [auth D]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
H [auth B]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
G [auth A]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
F [auth 9]PF12171Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz)Zinc-finger double-stranded RNA-binding- Family
CB [auth O]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
ZA [auth K]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
ZA [auth K]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
YA [auth 1]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
YA [auth 1]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
RA [auth Y]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
RA [auth Y]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
RA [auth Y]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
QA [auth 4]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1]. Domain
QA [auth 4]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins. Domain
QA [auth 4]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
PA [auth T]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
OA [auth W]PF08153NGP1NT (NUC091) domain (NGP1NT)NGP1NT (NUC091) domainThis N terminal domain is found in a subfamily of hypothetical nucleolar GTP-binding proteins similar to human NGP1 [1]. Domain
OA [auth W]PF0192650S ribosome-binding GTPase (MMR_HSR1)50S ribosome-binding GTPase- Family
OA [auth W]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
NA [auth R]PF03879Cgr1 family (Cgr1)Cgr1 family- Coiled-coil
NA [auth R]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
NA [auth R]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
D [auth 7]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
MA [auth C]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
MA [auth C]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
C [auth 6]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
W [auth Z]PF10169LLP homolog (LLPH)LLP homolog- Family
W [auth Z]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
V [auth X]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
U [auth V]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1]. Domain
U [auth V]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
U [auth V]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
T [auth U]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
T [auth U]PF08701GNL3L/Grn1 putative GTPase (GN3L_Grn1)GNL3L/Grn1 putative GTPase- Family
PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
R [auth Q]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
R [auth Q]PF06732Pescadillo N-terminus (Pescadillo_N)Pescadillo N-terminus- Family
Q [auth P]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
P [auth M]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
P [auth M]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
P [auth M]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
O [auth L]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
O [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
N [auth J]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
N [auth J]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
M [auth I]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
M [auth I]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
M [auth I]PF00467KOW motif (KOW)KOW motif- Family
L [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
L [auth H]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
L [auth H]PF00467KOW motif (KOW)KOW motif- Family
K [auth G]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
K [auth G]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
K [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
J [auth E]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
J [auth E]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
A [auth N]PF08158SDA1, HEAT repeat (SDA1_HEAT)SDA1, HEAT repeat- Repeat
A [auth N]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth D]60S ribosomal protein L4
H [auth B]60S ribosomal protein L3
G [auth A]60S ribosomal protein L29
F [auth 9]Zinc finger protein 593
GB [auth f]Ribosome biogenesis protein NOP53
FB [auth g]60S ribosomal protein L23a
EB [auth q]Pescadillo homolog
DB [auth 3]5S rRNA---
CB [auth O]60S ribosomal protein L38
BB [auth i]60S ribosomal protein L27
AB [auth F]60S ribosomal protein L34
ZA [auth K]60S ribosomal protein L36
YA [auth 1]60S ribosomal protein L7-like 1
XA [auth c]Ribosomal L1 domain-containing protein 1
E [auth 8]5.8S rRNA---
WA [auth x]ITS2---
VA [auth t]MKI67 FHA domain-interacting nucleolar phosphoprotein
UA [auth d]60S ribosomal protein L22
TA [auth j]60S ribosomal protein L31
SA [auth k]60S ribosomal protein L32
RA [auth Y]60S ribosomal protein L17
QA [auth 4]GTP-binding protein 4
PA [auth T]60S ribosomal protein L21
OA [auth W]Notchless protein homolog 1-
NA [auth R]60S ribosomal protein L5
D [auth 7]Probable ribosome biogenesis protein RLP24
MA [auth C]60S ribosomal protein L11
LA [auth z]Protein LLP homolog
KA [auth y]60S ribosomal protein L12
JA [auth w]G Protein Nucleolar 2
IA [auth v]mRNA turnover protein 4 homolog
HA [auth u]Guanine nucleotide-binding protein-like 3
GA [auth r]Coiled-coil domain-containing protein 86 -
FA [auth p]60S ribosomal protein L7
EA [auth o]60S ribosomal protein L6
DA [auth n]60S ribosomal protein L35a
C [auth 6]Eukaryotic translation initiation factor 6
CA [auth m]60S ribosomal protein L8
BA [auth l]60S ribosomal protein L28
AA [auth h]60S ribosomal protein L26
Z [auth e]60S ribosomal protein L23
Y [auth b]60S ribosomal protein L18a
X [auth a]60S ribosomal protein L19
W [auth Z]60S ribosomal protein L18
V [auth X]60S ribosomal protein L37a
U [auth V]60S ribosomal protein L13a
T [auth U]60S ribosomal protein L15
B [auth 2]28S rRNA---
60S ribosomal protein L14
R [auth Q]60S ribosomal protein L13
Q [auth P]60S ribosomal protein L39
P [auth M]60S ribosomal protein L37
O [auth L]60S ribosomal protein L27a
N [auth J]Ribosome biogenesis protein NSA2 homolog
M [auth I]60S ribosomal protein L9
L [auth H]60S ribosomal protein L35
K [auth G]60S ribosomal protein L7a
J [auth E]60S ribosomal protein L30
A [auth N]Protein SDA1 homolog-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth D]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
I [auth D]IPR002136Large ribosomal subunit protein uL4Family
I [auth D]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
I [auth D]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
I [auth D]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
H [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
H [auth B]IPR000597Large ribosomal subunit protein uL3Family
H [auth B]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
H [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth A]IPR002673Large ribosomal subunit protein eL29Family
F [auth 9]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
F [auth 9]IPR051879C2H2-type Zinc Finger Maturation ProteinFamily
F [auth 9]IPR013087Zinc finger C2H2-typeDomain
F [auth 9]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
F [auth 9]IPR022755Zinc finger, double-stranded RNA bindingDomain
GB [auth f]IPR011687Ribosome biogenesis protein Nop53/GLTSCR2Family
FB [auth g]IPR019985Large ribosomal subunit protein uL23Family
FB [auth g]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
FB [auth g]IPR013025Large ribosomal subunit protein uL23-likeFamily
FB [auth g]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
FB [auth g]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
FB [auth g]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
EB [auth q]IPR010613PescadilloFamily
EB [auth q]IPR001357BRCT domainDomain
EB [auth q]IPR036420BRCT domain superfamilyHomologous Superfamily
CB [auth O]IPR002675Large ribosomal subunit protein eL38Family
CB [auth O]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
BB [auth i]IPR001141Large ribosomal subunit protein eL27Family
BB [auth i]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BB [auth i]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BB [auth i]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BB [auth i]IPR005824KOWDomain
BB [auth i]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
AB [auth F]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
AB [auth F]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
AB [auth F]IPR008195Large ribosomal subunit protein eL34Family
ZA [auth K]IPR000509Large ribosomal subunit protein eL36Family
ZA [auth K]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
YA [auth 1]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
YA [auth 1]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
YA [auth 1]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
YA [auth 1]IPR039699Large ribosomal subunit protein uL30Family
YA [auth 1]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
YA [auth 1]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
YA [auth 1]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
XA [auth c]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
XA [auth c]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
XA [auth c]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
VA [auth t]IPR021043MKI67 FHA domain-interacting nucleolar phosphoprotein, FHA Ki67 bindingDomain
VA [auth t]IPR000504RNA recognition motif domainDomain
VA [auth t]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
VA [auth t]IPR035979RNA-binding domain superfamilyHomologous Superfamily
UA [auth d]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
UA [auth d]IPR002671Large ribosomal subunit protein eL22Family
TA [auth j]IPR000054Large ribosomal subunit protein eL31Family
TA [auth j]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
TA [auth j]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
SA [auth k]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
SA [auth k]IPR001515Large ribosomal subunit protein eL32Family
SA [auth k]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
RA [auth Y]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
RA [auth Y]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
RA [auth Y]IPR001063Large ribosomal subunit protein uL22Family
RA [auth Y]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
QA [auth 4]IPR024926Nucleolar GTP-binding protein 1Family
QA [auth 4]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
QA [auth 4]IPR005225Small GTP-binding domainDomain
QA [auth 4]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
QA [auth 4]IPR012973NOG, C-terminalDomain
QA [auth 4]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
QA [auth 4]IPR041623NOG1, N-terminal helical domainDomain
QA [auth 4]IPR006073GTP binding domainDomain
PA [auth T]IPR001147Large ribosomal subunit protein eL21Family
PA [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
PA [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
OA [auth W]IPR019775WD40 repeat, conserved siteConserved Site
OA [auth W]IPR012972NLEDomain
OA [auth W]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
OA [auth W]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
OA [auth W]IPR001632G-protein beta subunit-like, WD40 repeatsDomain
OA [auth W]IPR001680WD40 repeatRepeat
OA [auth W]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
NA [auth R]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
NA [auth R]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
D [auth 7]IPR011017TRASH domainDomain
D [auth 7]IPR056366Large ribosomal subunit protein eL24Family
D [auth 7]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
D [auth 7]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
D [auth 7]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
D [auth 7]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
MA [auth C]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
MA [auth C]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
MA [auth C]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
MA [auth C]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
MA [auth C]IPR002132Large ribosomal subunit protein uL5Family
LA [auth z]IPR018784LLP homolog-likeFamily
KA [auth y]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
KA [auth y]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
KA [auth y]IPR000911Ribosomal protein uL11Family
KA [auth y]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
KA [auth y]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
KA [auth y]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
JA [auth w]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
JA [auth w]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
JA [auth w]IPR024929Nucleolar GTP-binding protein 2, circularly permuted GTPase motifDomain
JA [auth w]IPR006073GTP binding domainDomain
JA [auth w]IPR012971Nucleolar GTP-binding protein 2, N-terminal domainDomain
JA [auth w]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
JA [auth w]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IA [auth v]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
IA [auth v]IPR001790Large ribosomal subunit protein uL10Family
IA [auth v]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
IA [auth v]IPR051742Ribosomal Assembly Factor uL10Family
IA [auth v]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
IA [auth v]IPR033867Ribosome assembly factor Mrt4Family
HA [auth u]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
HA [auth u]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
HA [auth u]IPR006073GTP binding domainDomain
HA [auth u]IPR014813Guanine nucleotide-binding protein-like 3, N-terminal domainDomain
HA [auth u]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
GA [auth r]IPR026570Coiled-coil domain-containing protein 86Family
GA [auth r]IPR005579Cgr1-likeFamily
FA [auth p]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
FA [auth p]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
FA [auth p]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
FA [auth p]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
FA [auth p]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
FA [auth p]IPR039699Large ribosomal subunit protein uL30Family
FA [auth p]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
EA [auth o]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
EA [auth o]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
EA [auth o]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
EA [auth o]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
EA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EA [auth o]IPR000915Large ribosomal subunit protein eL6Family
DA [auth n]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
DA [auth n]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
DA [auth n]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth n]IPR001780Large ribosomal subunit protein eL33Family
C [auth 6]IPR002769Translation initiation factor IF6Family
CA [auth m]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
CA [auth m]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth m]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth m]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth m]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
CA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth m]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth m]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth m]IPR002171Large ribosomal subunit protein uL2Family
BA [auth l]IPR029004Ribosomal eL28/Mak16Domain
BA [auth l]IPR002672Large ribosomal subunit protein eL28Family
AA [auth h]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth h]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
AA [auth h]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth h]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth h]IPR005824KOWDomain
AA [auth h]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Z [auth e]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Z [auth e]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Z [auth e]IPR000218Large ribosomal subunit protein uL14Family
Y [auth b]IPR028877Large ribosomal subunit protein eL20Family
Y [auth b]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
Y [auth b]IPR023573Large ribosomal subunit protein eL20 domainDomain
X [auth a]IPR039547Large ribosomal subunit protein eL19Family
X [auth a]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
X [auth a]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
X [auth a]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
X [auth a]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
X [auth a]IPR000196Large ribosomal subunit protein eL19 domainDomain
W [auth Z]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
W [auth Z]IPR000039Large ribosomal subunit protein eL18Family
W [auth Z]IPR021131Large ribosomal subunit protein uL15/eL18Domain
W [auth Z]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth X]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
V [auth X]IPR002674Large ribosomal subunit protein eL43Family
V [auth X]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
U [auth V]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
U [auth V]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
U [auth V]IPR005822Large ribosomal subunit protein uL13Family
U [auth V]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
T [auth U]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
T [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth U]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
T [auth U]IPR000439Large ribosomal subunit protein eL15Family
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR039660Large ribosomal subunit protein eL14Family
IPR002784Large ribosomal subunit protein eL14 domainDomain
R [auth Q]IPR001380Large ribosomal subunit protein eL13Family
R [auth Q]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
Q [auth P]IPR000077Large ribosomal subunit protein eL39Family
Q [auth P]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
Q [auth P]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
P [auth M]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
P [auth M]IPR001569Large ribosomal subunit protein eL37Family
P [auth M]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
P [auth M]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
O [auth L]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
O [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
O [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
O [auth L]IPR030878Large ribosomal subunit protein uL15Family
O [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
N [auth J]IPR039411Ribosomal biogenesis NSA2 familyFamily
N [auth J]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
M [auth I]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
M [auth I]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
M [auth I]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
M [auth I]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth H]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
L [auth H]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
L [auth H]IPR001854Large ribosomal subunit protein uL29Family
L [auth H]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
K [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
K [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
K [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
K [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
K [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
J [auth E]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
J [auth E]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth E]IPR000231Large ribosomal subunit protein eL30Family
J [auth E]IPR039109Large ribosomal subunit protein eL30-likeFamily
J [auth E]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
A [auth N]IPR048292SDA1, C-terminal domainDomain
A [auth N]IPR016024Armadillo-type foldHomologous Superfamily
A [auth N]IPR007949SDA1, middle domainDomain
A [auth N]IPR027312Sda1Family
A [auth N]IPR012977SDA1, N-terminalDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth D]PharosP36578
H [auth B]PharosP39023
F [auth 9]PharosO00488
GB [auth f]PharosQ9NZM5
FB [auth g]PharosP62750
EB [auth q]PharosO00541
CB [auth O]PharosP63173
BB [auth i]PharosP61353
AB [auth F]PharosP49207
ZA [auth K]PharosQ9Y3U8
YA [auth 1]PharosQ6DKI1
XA [auth c]PharosO76021
VA [auth t]PharosQ9BYG3
UA [auth d]PharosP35268
TA [auth j]PharosP62899
SA [auth k]PharosP62910
RA [auth Y]PharosP18621
QA [auth 4]PharosQ9BZE4
PA [auth T]PharosP46778
OA [auth W]PharosQ9NVX2
NA [auth R]PharosP46777
D [auth 7]PharosQ9UHA3
MA [auth C]PharosP62913
LA [auth z]PharosQ9BRT6
KA [auth y]PharosP30050
JA [auth w]PharosQ13823
IA [auth v]PharosQ9UKD2
HA [auth u]PharosQ9BVP2
GA [auth r]PharosQ9H6F5
FA [auth p]PharosP18124
EA [auth o]PharosQ02878
DA [auth n]PharosP18077
C [auth 6]PharosP56537
BA [auth l]PharosP46779
AA [auth h]PharosP61254
Z [auth e]PharosP62829
X [auth a]PharosP84098
W [auth Z]PharosQ07020
V [auth X]PharosP61513
U [auth V]PharosP40429
T [auth U]PharosP61313
PharosP50914
R [auth Q]PharosP26373
P [auth M]PharosP61927
O [auth L]PharosP46776
N [auth J]PharosO95478
M [auth I]PharosP32969
L [auth H]PharosP42766
K [auth G]PharosP62424
J [auth E]PharosP62888
A [auth N]PharosQ9NVU7