8IO8 | pdb_00008io8

Cryo-EM structure of cyanobacteria phosphoketolase complexed with AMPPNPin dimeric assembly

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Azf-rbx1e8io8A1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-rbx1ECOD (v294.1)
BCullin_ABe8io8B1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09363XFP C-terminal domain (XFP_C)XFP C-terminal domain- Family
A, B
PF09364XFP N-terminal domain (XFP_N)XFP N-terminal domain- Family
A, B
PF03894D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase (XFP)D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Probable phosphoketolase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR019789Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding siteBinding Site
A, B
IPR019790Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved siteConserved Site
A, B
IPR023962Probable phosphoketolaseFamily
A, B
IPR018969Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminalDomain
A, B
IPR005593Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolaseFamily
A, B
IPR029061Thiamin diphosphate-binding foldHomologous Superfamily
A, B
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIHomologous Superfamily
A, B
IPR018970Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminalDomain