8HMF | pdb_00008hmf

head module state 2 of Tetrahymena IFT-A

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth E]	PF23389	WDR19 first beta-propeller (Beta-prop_WDR19_1st)	WDR19 first beta-propeller	-	Repeat
C [auth E]	PF24762	IF140/IFT172 TPR domain (TPR_IF140-IFT172)	IF140/IFT172 TPR domain	-	Repeat
C [auth E]	PF15911	WDR19 second beta-propeller (Beta-prop_WDR19_2nd)	WDR19 second beta-propeller	-	Repeat
B [auth D]	PF24762	IF140/IFT172 TPR domain (TPR_IF140-IFT172)	IF140/IFT172 TPR domain	-	Repeat
B [auth D]	PF24760	IF140 C-terminal TPR domain (TPR_IF140_C)	IF140 C-terminal TPR domain	-	Repeat
B [auth D]	PF23385	IFT140 second beta-propeller (Beta-prop_IFT140_2nd)	IFT140 second beta-propeller	-	Repeat
B [auth D]	PF23383	IFT140 first beta-propeller (Beta-prop_IFT140_1st)	IFT140 first beta-propeller	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth E]	WD40 repeat protein	-	cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport organelle assembly plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly cilium assembly cell projection assembly	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A
B [auth D]	Intraflagellar transporter	-	cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm ciliary basal body microtubule organizing center microtubule cytoskeleton
A	Intraflagellar transport protein 122 homolog	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization cellular localization transport intracellular transport intraciliary retrograde transport establishment of localization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle non-motile cilium cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth E]	IPR039468	WDR19, WD40 repeat domain	Domain
C [auth E]	IPR056168	IF140/IFT172/WDR19, TPR domain	Domain
C [auth E]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
C [auth E]	IPR040379	WD repeat-containing protein 19/dyf-2	Family
C [auth E]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C [auth E]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C [auth E]	IPR057855	WDR19, first beta-propeller	Domain
B [auth D]	IPR001680	WD40 repeat	Repeat
B [auth D]	IPR056168	IF140/IFT172/WDR19, TPR domain	Domain
B [auth D]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
B [auth D]	IPR056156	IF140, C-terminal TPR domain	Domain
B [auth D]	IPR056154	IFT140, first beta-propeller domain	Domain
B [auth D]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
B [auth D]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B [auth D]	IPR056155	IFT140, second beta-propeller domain	Domain
A	IPR001680	WD40 repeat	Repeat
A	IPR056153	IFT122/SMU1, beta-propeller domain	Domain
A	IPR039857	Intraflagellar transport protein 122/121 homolog	Family
A	IPR056152	IFT122, second beta-propeller domain	Domain
A	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A	IPR057411	Intraflagellar transport protein 122 homolog, TPR domain	Domain