8HHS | pdb_00008hhs

Structure of human apoferritin embedded in crystalline ice


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
XSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
U [auth T]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
T [auth S]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
S [auth R]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
R [auth Q]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
Q [auth P]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
P [auth O]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
O [auth N]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
N [auth M]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
M [auth L]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
K [auth J]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
I [auth H]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
E [auth D]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
D [auth C]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
A [auth U]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
XV-sete8hhsX1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
WV-sete8hhsW1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
VV-sete8hhsV1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
U [auth T]V-sete8hhsT1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
T [auth S]V-sete8hhsS1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
S [auth R]V-sete8hhsR1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
R [auth Q]V-sete8hhsQ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
Q [auth P]V-sete8hhsP1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
P [auth O]V-sete8hhsO1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
O [auth N]V-sete8hhsN1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
N [auth M]V-sete8hhsM1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
M [auth L]V-sete8hhsL1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
L [auth K]V-sete8hhsK1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
K [auth J]V-sete8hhsJ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
J [auth I]V-sete8hhsI1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
I [auth H]V-sete8hhsH1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
H [auth G]V-sete8hhsG1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
G [auth F]V-sete8hhsF1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
F [auth E]V-sete8hhsE1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
E [auth D]V-sete8hhsD1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
D [auth C]V-sete8hhsC1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
C [auth B]V-sete8hhsB1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
B [auth A]V-sete8hhsA1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
A [auth U]V-sete8hhsU1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
X1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
W1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
V1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
U [auth T]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
T [auth S]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
S [auth R]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
R [auth Q]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
Q [auth P]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
P [auth O]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
O [auth N]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
N [auth M]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
M [auth L]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
L [auth K]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
K [auth J]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
J [auth I]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
I [auth H]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
H [auth G]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
G [auth F]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
F [auth E]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
E [auth D]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
D [auth C]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
C [auth B]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
B [auth A]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)
A [auth U]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00210Ferritin-like domain (Ferritin)Ferritin-like domainThis family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ferritin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009040Ferritin-like diiron domainDomain
IPR012347Ferritin-likeHomologous Superfamily
IPR009078Ferritin-like superfamilyHomologous Superfamily
IPR008331Ferritin/DPS domainDomain
IPR001519FerritinFamily
IPR014034Ferritin, conserved siteConserved Site