8H2T

Cryo-EM structure of IadD/E dioxygenase bound with IAA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]F_UNCLASSIFIEDe8h2tB2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
A [auth B]PF00848e8h2tB3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00848ECOD (1.6)
A [auth B]PF00355e8h2tB1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
C [auth D]F_UNCLASSIFIEDe8h2tD1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
C [auth D]PF00848e8h2tD2 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00848ECOD (1.6)
C [auth D]PF00355e8h2tD3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
E [auth G]F_UNCLASSIFIEDe8h2tG1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
E [auth G]PF00848e8h2tG3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00848ECOD (1.6)
E [auth G]PF00355e8h2tG2 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
D [auth E]PF00866e8h2tE1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF00866ECOD (1.6)
F [auth H]PF00866e8h2tH1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF00866ECOD (1.6)
B [auth A]PF00866e8h2tA1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF00866ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
C [auth D],
E [auth G]
PF00848Ring hydroxylating alpha subunit (catalytic domain) (Ring_hydroxyl_A)Ring hydroxylating alpha subunit (catalytic domain)This family is the catalytic domain of aromatic-ring- hydroxylating dioxygenase systems. The active site contains a non-heme ferrous ion coordinated by three ligands.Domain
A [auth B],
C [auth D],
E [auth G]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
B [auth A],
D [auth E],
F [auth H]
PF00866Ring hydroxylating beta subunit (Ring_hydroxyl_B)Ring hydroxylating beta subunitThis subunit has a similar structure to NTF-2 and scytalone dehydratase.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
C [auth D],
E [auth G]
Rieske (2Fe-2S) domain protein - -
B [auth A],
D [auth E],
F [auth H]
Aromatic-ring-hydroxylating dioxygenase beta subunit -