Structure of Type VI secretion system cargo delivery vehicle Hcp-VgrG-PAAR
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | V-set | e8graB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: V-set | ECOD (v294.1) |
| F [auth A] | Glyco_hydro_43 | e8graA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Glyco_hydro_43 | ECOD (v294.1) |
| G [auth F] | Glyco_hydro_43 | e8graF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Glyco_hydro_43 | ECOD (v294.1) |
| H [auth E] | Glyco_hydro_43 | e8graE1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Glyco_hydro_43 | ECOD (v294.1) |
| I [auth D] | Glyco_hydro_43 | e8graD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Glyco_hydro_43 | ECOD (v294.1) |
| J [auth C] | Glyco_hydro_43 | e8graC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Glyco_hydro_43 | ECOD (v294.1) |
| C [auth I] | Phage_base_V | e8graI01 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: Phage_base_V | ECOD (v294.1) |
| C [auth I] | Glyco_transf_88 | e8graI06 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: Glyco_transf_88 | ECOD (v294.1) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth J], K [auth J1], L [auth J2] | IPR008727 | PAAR motif | Repeat |
| C [auth I], D [auth H], E [auth G] | IPR006531 | Gp5/Type VI secretion system Vgr protein, OB-fold domain | Domain |
| C [auth I], D [auth H], E [auth G] | IPR037026 | Vgr protein, OB-fold domain superfamily | Homologous Superfamily |














