8GRA | pdb_00008gra

Structure of Type VI secretion system cargo delivery vehicle Hcp-VgrG-PAAR


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth G]MIF4Ge8graG1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: MIF4GECOD (v295.2)
D [auth H]MIF4Ge8graH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: MIF4GECOD (v295.2)
C [auth I]Phage_base_Ve8graI01 A: alpha arraysX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Phage_base_VECOD (v295.2)
C [auth I]WD40e8graI06 A: alpha arraysX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: WD40ECOD (v295.2)
J [auth C]Glyco_hydro_43e8graC1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
I [auth D]Glyco_hydro_43e8graD1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
H [auth E]Glyco_hydro_43e8graE1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
G [auth F]Glyco_hydro_43e8graF1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
F [auth A]Glyco_hydro_43e8graA1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
BV-sete8graB1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: V-setECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth I],
D [auth H],
E [auth G]
Type VI secretion system spike protein VgrG- - -
Bacterodales T6SS protein TssD (Hcp)- -
A [auth J],
K [auth J1],
L [auth J2]
Type VI secretion system spike protein Paar- - -