8FFR | pdb_00008ffr

Revised structure of the rabies virus nucleoprotein-RNA complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
V	Rhabdo_ncap	e8ffrV1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
U	Rhabdo_ncap	e8ffrU1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
T	Rhabdo_ncap	e8ffrT1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
S	Rhabdo_ncap	e8ffrS1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
R	Rhabdo_ncap	e8ffrR1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
Q	Rhabdo_ncap	e8ffrQ1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
P	Rhabdo_ncap	e8ffrP1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
O	Rhabdo_ncap	e8ffrO1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
N	Rhabdo_ncap	e8ffrN1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
M	Rhabdo_ncap	e8ffrM1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
L	Rhabdo_ncap	e8ffrL1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
K	Rhabdo_ncap	e8ffrK1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
J	Rhabdo_ncap	e8ffrJ1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
I	Rhabdo_ncap	e8ffrI1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
H	Rhabdo_ncap	e8ffrH1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
G	Rhabdo_ncap	e8ffrG1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
F	Rhabdo_ncap	e8ffrF1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
E	Rhabdo_ncap	e8ffrE1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
D	Rhabdo_ncap	e8ffrD1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
C	Rhabdo_ncap	e8ffrC1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
B	Rhabdo_ncap	e8ffrB1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
A	Rhabdo_ncap	e8ffrA1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	PF00945	Rhabdovirus nucleocapsid protein (Rhabdo_ncap)	Rhabdovirus nucleocapsid protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
X	RNA (99-MER)	-	-	-
W	RNA (99-MER)	-	-	-
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	Nucleoprotein	RNA binding binding nucleic acid binding	-	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR035961	Rhabdovirus nucleoprotein-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR000448	Rhabdovirus nucleocapsid	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR023330	Rhabdovirus nucleocapsid, N-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	IPR023331	Rhabdovirus nucleocapsid, C-terminal	Homologous Superfamily