Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth D]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083400 3001473 SCOP2B (2022-06-29)
N [auth I]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082661 3000100 SCOP2B (2022-06-29)
O [auth J]SCOP2B SuperfamilyRibosomal protein S108102681 3001336 SCOP2B (2022-06-29)
P [auth M]SCOP2B SuperfamilyS13-like H2TH domain8098358 3000053 SCOP2B (2022-06-29)
Q [auth N]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052568 3000068 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyRibosomal protein S198103915 3000686 SCOP2B (2022-06-29)
C [auth F]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2022-06-29)
D [auth H]SCOP2B SuperfamilyRibosomal protein S88079059 3000709 SCOP2B (2022-06-29)
E [auth K]SCOP2B SuperfamilyTranslational machinery components8035368 3000571 SCOP2B (2022-06-29)
F [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins8106545 3000135 SCOP2B (2022-06-29)
G [auth O]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8032375 3001284 SCOP2B (2022-06-29)
H [auth P]SCOP2B SuperfamilyRibosomal protein S168106547 3000680 SCOP2B (2022-06-29)
I [auth Q]SCOP2B SuperfamilyNucleic acid-binding proteins8059276 3000135 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth D]PF00163,PF01479e8eyqD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
J [auth R]PF01084e8eyqR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
K [auth T]PF01649e8eyqT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
M [auth C]PF00189e8eyqC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
M [auth C]PF07650e8eyqC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
N [auth I]PF00380e8eyqI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
O [auth J]PF00338e8eyqJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
P [auth M]PF00416e8eyqM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
Q [auth N]PF00253e8eyqN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
R [auth S]PF00203e8eyqS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
B [auth E]PF03719e8eyqE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
B [auth E]PF00333e8eyqE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
C [auth F]PF01250e8eyqF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
D [auth H]PF00410e8eyqH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
D [auth H]PF00410e8eyqH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
E [auth K]PF00411e8eyqK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
F [auth L]PF00164e8eyqL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
G [auth O]PF00312e8eyqO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
H [auth P]PF00886e8eyqP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
I [auth Q]PF00366e8eyqQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth D]30S ribosomal protein S4
J [auth R]30S ribosomal protein S18
K [auth T]30S ribosomal protein S20
L [auth A]16S_rRNA---
M [auth C]30S ribosomal protein S3
N [auth I]30S ribosomal protein S9
O [auth J]30S ribosomal protein S10
P [auth M]30S ribosomal protein S13
Q [auth N]30S ribosomal protein S14
R [auth S]30S ribosomal protein S19
B [auth E]30S ribosomal protein S5
C [auth F]30S ribosomal protein S6
D [auth H]30S ribosomal protein S8
E [auth K]30S ribosomal protein S11
F [auth L]30S ribosomal protein S12
G [auth O]30S ribosomal protein S15
H [auth P]30S ribosomal protein S16
I [auth Q]30S ribosomal protein S17

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth D]IPR002942RNA-binding S4 domainDomain
A [auth D]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
A [auth D]IPR022801Small ribosomal subunit protein uS4Family
A [auth D]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
A [auth D]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
A [auth D]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
J [auth R]IPR001648Small ribosomal subunit protein bS18Family
J [auth R]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
J [auth R]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
K [auth T]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
K [auth T]IPR002583Small ribosomal subunit protein bS20Family
M [auth C]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
M [auth C]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
M [auth C]IPR004087K Homology domainDomain
M [auth C]IPR004044K Homology domain, type 2Domain
M [auth C]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
M [auth C]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
M [auth C]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
M [auth C]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
N [auth I]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
N [auth I]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
N [auth I]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
N [auth I]IPR000754Small ribosomal subunit protein uS9Family
N [auth I]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
O [auth J]IPR027486Small ribosomal subunit protein uS10 domainDomain
O [auth J]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
O [auth J]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
O [auth J]IPR001848Small ribosomal subunit protein uS10Family
P [auth M]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
P [auth M]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
P [auth M]IPR001892Small ribosomal subunit protein uS13Family
P [auth M]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
P [auth M]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
Q [auth N]IPR001209Small ribosomal subunit protein uS14Family
Q [auth N]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
Q [auth N]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
R [auth S]IPR002222Small ribosomal subunit protein uS19Family
R [auth S]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
R [auth S]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
R [auth S]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
B [auth E]IPR000851Small ribosomal subunit protein uS5Family
B [auth E]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
B [auth E]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
B [auth E]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
B [auth E]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
B [auth E]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
B [auth E]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
C [auth F]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
C [auth F]IPR000529Small ribosomal subunit protein bS6Family
C [auth F]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
C [auth F]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
C [auth F]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
D [auth H]IPR000630Small ribosomal subunit protein uS8Family
D [auth H]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
D [auth H]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
E [auth K]IPR001971Small ribosomal subunit protein uS11Family
E [auth K]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
E [auth K]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
E [auth K]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
F [auth L]IPR005679Ribosomal protein uS12, bacterial-typeFamily
F [auth L]IPR006032Small ribosomal subunit protein uS12Family
F [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
G [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
G [auth O]IPR000589Small ribosomal subunit protein uS15Family
G [auth O]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
H [auth P]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
H [auth P]IPR000307Small ribosomal subunit protein bS16Family
H [auth P]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
I [auth Q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
I [auth Q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
I [auth Q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth Q]IPR000266Small ribosomal subunit protein uS17Family