8EUF
Class2 of the INO80-Nucleosome complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F [auth V] | PF06068 | e8eufV3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF06068 | ECOD (1.6) |
F [auth V] | PF17856 | e8eufV1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17856 | ECOD (1.6) |
F [auth V] | PF06068 | e8eufV2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF06068 | ECOD (1.6) |
D [auth T] | PF06068 | e8eufT2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF06068 | ECOD (1.6) |
D [auth T] | PF17856 | e8eufT1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17856 | ECOD (1.6) |
D [auth T] | PF06068 | e8eufT3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF06068 | ECOD (1.6) |
H [auth X] | PF06068 | e8eufX3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF06068 | ECOD (1.6) |
H [auth X] | PF17856 | e8eufX1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17856 | ECOD (1.6) |
H [auth X] | PF06068 | e8eufX2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF06068 | ECOD (1.6) |
E [auth U] | PF06068 | e8eufU3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF06068 | ECOD (1.6) |
E [auth U] | PF17856 | e8eufU1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17856 | ECOD (1.6) |
E [auth U] | PF06068 | e8eufU2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF06068 | ECOD (1.6) |
G [auth W] | PF06068 | e8eufW3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF06068 | ECOD (1.6) |
G [auth W] | PF17856 | e8eufW2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17856 | ECOD (1.6) |
G [auth W] | PF06068 | e8eufW1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF06068 | ECOD (1.6) |
I [auth Y] | PF06068 | e8eufY2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF06068 | ECOD (1.6) |
I [auth Y] | PF17856 | e8eufY3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17856 | ECOD (1.6) |
I [auth Y] | PF06068 | e8eufY1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF06068 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth Q] | PF00176 | SNF2-related domain (SNF2-rel_dom) | SNF2-related domain | This domain is found in proteins involved in a variety of processes including transcription regulation (e.g., SNF2, STH1, brahma, MOT1), DNA repair (e.g., ERCC6, RAD16, RAD5), DNA recombination (e.g., RAD54), and chromatin unwinding (e.g., ISWI) as w ... | Domain |
B [auth R] | PF00022 | Actin (Actin) | Actin | - | Family |
C [auth S] | PF08265 | YL1 nuclear protein C-terminal domain (YL1_C) | YL1 nuclear protein C-terminal domain | This domain is found in proteins of the YL1 family [1]. These proteins have been shown to be DNA-binding and may be a transcription factor [1]. This domain is found in proteins that are not YL1 proteins. | Domain |
D [auth T], F [auth V], H [auth X] | PF06068 | TIP49 P-loop domain (TIP49) | TIP49 P-loop domain | This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ... | Domain |
D [auth T], F [auth V], H [auth X] | PF17856 | TIP49 AAA-lid domain (TIP49_C) | TIP49 AAA-lid domain | This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ... | Domain |
E [auth U], G [auth W], I [auth Y] | PF06068 | TIP49 P-loop domain (TIP49) | TIP49 P-loop domain | This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ... | Domain |
E [auth U], G [auth W], I [auth Y] | PF17856 | TIP49 AAA-lid domain (TIP49_C) | TIP49 AAA-lid domain | This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the Pfam:PF00004 domain. In zebrafish, the liebeskummer (lik) ... | Domain |
J [auth Z] | PF04795 | PAPA-1-like conserved region (PAPA-1) | PAPA-1-like conserved region | - | Family |