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 8EN3 | pdb_00008en3

Structure of GII.17 norovirus in complex with Nanobody 45

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DIon_transe8en3D1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Ion_transECOD (v295.2)
CIon_transe8en3C1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Ion_transECOD (v295.2)
BIon_transe8en3B1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Ion_transECOD (v295.2)
AIon_transe8en3A1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Ion_transECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C, D
Heavy ChainIGHV1 -capsid protein vp1SAbDab (2026-10-23)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Nanobody 45---
A, B
Capsid protein VP1- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR029053Viral coat protein subunitHomologous Superfamily
A, B
IPR004005Calicivirus coat proteinDomain
A, B
IPR013643Calicivirus coat protein C-terminalDomain
A, B
IPR033703Picornavirus/Calicivirus coat proteinDomain