Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with 2130-1-0114-112
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
C [auth G] | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|
A [auth E] | Heavy Chain | IGHV3 | - | spike protein s2' | SAbDab (2024-05-31) |
B [auth F] | Light Chain | IGKV4 | Kappa | spike protein s2' | SAbDab (2024-05-31) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
A [auth E] | Fab LLNL-199 HC | - | - | - |
B [auth F] | Fab LLNL-199 LC | - | - | - |
C [auth G] | Spike protein S2' | | | |
Chains | Accession | Name | Type |
---|
C [auth G] | IPR044873 | Spike glycoprotein S2, coronavirus, heptad repeat 1 | Domain |
C [auth G] | IPR044366 | Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2 | Domain |
C [auth G] | IPR018548 | Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus | Domain |
C [auth G] | IPR044341 | Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-like | Domain |
C [auth G] | IPR032500 | Spike glycoprotein S1, N-terminal domain, betacoronavirus-like | Domain |
C [auth G] | IPR042578 | Spike glycoprotein, betacoronavirus | Family |
C [auth G] | IPR036326 | Spike S1 subunit, receptor binding domain superfamily, betacoronavirus | Homologous Superfamily |
C [auth G] | IPR043002 | Spike glycoprotein, N-terminal domain superfamily | Homologous Superfamily |
C [auth G] | IPR044874 | Spike glycoprotein S2, coronavirus, heptad repeat 2 | Domain |
C [auth G] | IPR043473 | Spike glycoprotein S2 superfamily, coronavirus | Homologous Superfamily |
C [auth G] | IPR043607 | Coronavirus spike glycoprotein S1, C-terminal | Domain |
C [auth G] | IPR002552 | Spike glycoprotein S2, coronavirus | Domain |