8DWU | pdb_00008dwu

SPOP W22R Form 1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
FSCOP2B SuperfamilyTRAF domain-like 8039223 3001027 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyTRAF domain-like 8039223 3001027 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTRAF domain-like 8039223 3001027 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTRAF domain-like 8039223 3001027 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTRAF domain-like 8039223 3001027 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTRAF domain-like 8039223 3001027 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IBACKe8dwuI1 A: alpha superhelicesX: Repetitive alpha hairpinsH: BACK domain (From Topology)T: BACK domainF: BACKECOD (1.6)
IBTBe8dwuI2 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: BTBECOD (1.6)
HBACKe8dwuH1 A: alpha superhelicesX: Repetitive alpha hairpinsH: BACK domain (From Topology)T: BACK domainF: BACKECOD (1.6)
HBTBe8dwuH2 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: BTBECOD (1.6)
G [auth J]BACKe8dwuJ1 A: alpha superhelicesX: Repetitive alpha hairpinsH: BACK domain (From Topology)T: BACK domainF: BACKECOD (1.6)
G [auth J]BTBe8dwuJ2 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: BTBECOD (1.6)
AMATHe8dwuA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: TRAF domain-like (From Topology)T: TRAF domain-likeF: MATHECOD (1.6)
ABTBe8dwuA2 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: BTBECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF22486MATH domain (MATH_2)MATH domainThis motif has been called the Meprin And TRAF-Homology (MATH) domain.ED A0A835B747.1/23-123; A0A835B747.1/23-76; Domain
A,
B,
C,
D,
E,
PF00651BTB/POZ domain (BTB)BTB/POZ domainThe BTB (for BR-C, ttk and bab) [1] or POZ (for Pox virus and Zinc finger) [2] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family o ...The BTB (for BR-C, ttk and bab) [1] or POZ (for Pox virus and Zinc finger) [2] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [2]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [3]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [4,5,6]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
Speckle-type POZ protein

InterPro: Protein Family Classification InterPro Database Homepage